Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YMR119W-A	YMR119W-A	375 nt		5.19	□□□□□ -1.58
CAF16	P43569	PFA3	YNL326C	1011 nt		5.19	□□□□□ -1.58
CAF16	P43569	YBR056W-A	YBR056W-A	201 nt		5.19	□□□□□ -1.58
CAF16	P43569	RRP7	YCL031C	894 nt		5.19	□□□□□ -1.58
CAF16	P43569	YEH1	YLL012W	1722 nt		5.18	□□□□□ -1.58
CAF16	P43569	YDR056C	YDR056C	618 nt		5.18	□□□□□ -1.58
CAF16	P43569	RPT3	YDR394W	1287 nt		5.18	□□□□□ -1.58
CAF16	P43569	BET1	YIL004C	429 nt		5.18	□□□□□ -1.58
CAF16	P43569	PCL7	YIL050W	858 nt		5.18	□□□□□ -1.58
CAF16	P43569	AIR1	YIL079C	1083 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP2	tY(GUA)D	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP11	tY(GUA)F1	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP6	tY(GUA)F2	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP7	tY(GUA)J1	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP4	tY(GUA)J2	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP5	tY(GUA)M1	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP8	tY(GUA)M2	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	SUP3	tY(GUA)O	75 nt		5.18	□□□□□ -1.58
CAF16	P43569	HOC1	YJR075W	1191 nt		5.18	□□□□□ -1.58
CAF16	P43569	YKR070W	YKR070W	1059 nt		5.18	□□□□□ -1.58
CAF16	P43569	NRM1	YNR009W	750 nt		5.18	□□□□□ -1.58
CAF16	P43569	PLB3	YOL011W	2061 nt		5.18	□□□□□ -1.58
CAF16	P43569	MKS1	YNL076W	1755 nt		5.18	□□□□□ -1.58
CAF16	P43569	EXG1	YLR300W	1347 nt		5.18	□□□□□ -1.58
CAF16	P43569	EAR1	YMR171C	1653 nt		5.18	□□□□□ -1.58
CAF16	P43569	YTM1	YOR272W	1383 nt		5.17	□□□□□ -1.58
CAF16	P43569	HXT5	YHR096C	1779 nt		5.17	□□□□□ -1.58
CAF16	P43569	YFL040W	YFL040W	1623 nt		5.17	□□□□□ -1.58
CAF16	P43569	YDR053W	YDR053W	396 nt		5.17	□□□□□ -1.58
CAF16	P43569	MNN10	YDR245W	1182 nt		5.17	□□□□□ -1.58
CAF16	P43569	YEL077C	YEL077C	3834 nt		5.17	□□□□□ -1.58
CAF16	P43569	PHO86	YJL117W	936 nt		5.17	□□□□□ -1.58
CAF16	P43569	YJL156W-A	YJL156W-A	222 nt		5.17	□□□□□ -1.58
CAF16	P43569	YKL102C	YKL102C	306 nt		5.17	□□□□□ -1.58
CAF16	P43569	PRX1	YBL064C	786 nt		5.17	□□□□□ -1.58
CAF16	P43569	ATG34	YOL083W	1239 nt		5.17	□□□□□ -1.58
CAF16	P43569	YOL106W	YOL106W	354 nt		5.17	□□□□□ -1.58
CAF16	P43569	APM3	YBR288C	1452 nt		5.17	□□□□□ -1.58
CAF16	P43569	ESF1	YDR365C	1887 nt		5.17	□□□□□ -1.58
CAF16	P43569	KTR6	YPL053C	1341 nt		5.17	□□□□□ -1.58
CAF16	P43569	DFG5	YMR238W	1377 nt		5.16	□□□□□ -1.58
CAF16	P43569	RPN4	YDL020C	1596 nt		5.16	□□□□□ -1.58
CAF16	P43569	ART10	YLR392C	1557 nt		5.16	□□□□□ -1.58
CAF16	P43569	YCL068C	YCL068C	783 nt		5.16	□□□□□ -1.58
CAF16	P43569	GPD1	YDL022W	1176 nt		5.16	□□□□□ -1.58
CAF16	P43569	RTA1	YGR213C	954 nt		5.16	□□□□□ -1.58
CAF16	P43569	YHR193C-A	YHR193C-A	375 nt		5.16	□□□□□ -1.58
CAF16	P43569	HSP82	YPL240C	2130 nt		5.16	□□□□□ -1.58
CAF16	P43569	CCL1	YPR025C	1182 nt		5.16	□□□□□ -1.58
CAF16	P43569	ICS2	YBR157C	768 nt		5.16	□□□□□ -1.58
CAF16	P43569	TRE2	YOR256C	2430 nt		5.16	□□□□□ -1.58
CAF16	P43569	LAP3	YNL239W	1365 nt		5.16	□□□□□ -1.58
CAF16	P43569	BUD14	YAR014C	2130 nt		5.15	□□□□□ -1.58
CAF16	P43569	FRE3	YOR381W	2136 nt		5.15	□□□□□ -1.58
CAF16	P43569	SMF2	YHR050W	1650 nt		5.15	□□□□□ -1.58
CAF16	P43569	CRH1	YGR189C	1524 nt		5.15	□□□□□ -1.58
CAF16	P43569	YCR101C	YCR101C	549 nt		5.15	□□□□□ -1.59
CAF16	P43569	ISC10	YER180C	804 nt		5.15	□□□□□ -1.59
CAF16	P43569	LDB7	YBL006C	543 nt		5.15	□□□□□ -1.59
CAF16	P43569	LST8	YNL006W	912 nt		5.15	□□□□□ -1.59
CAF16	P43569	MED8	YBR193C	672 nt		5.15	□□□□□ -1.59
CAF16	P43569	YCK1	YHR135C	1617 nt		5.15	□□□□□ -1.59
CAF16	P43569	ALG11	YNL048W	1647 nt		5.15	□□□□□ -1.59
CAF16	P43569	RAD53	YPL153C	2466 nt		5.15	□□□□□ -1.59
CAF16	P43569	PIF1	YML061C	2580 nt		5.14	□□□□□ -1.59
CAF16	P43569	MEK1	YOR351C	1494 nt		5.14	□□□□□ -1.59
CAF16	P43569	MPH3	YJR160C	1809 nt		5.14	□□□□□ -1.59
CAF16	P43569	FRS2	YFL022C	1512 nt		5.14	□□□□□ -1.59
CAF16	P43569	RAD55	YDR076W	1221 nt		5.14	□□□□□ -1.59
CAF16	P43569	ERD1	YDR414C	1089 nt		5.14	□□□□□ -1.59
CAF16	P43569	YER067C-A	YER067C-A	324 nt		5.14	□□□□□ -1.59
CAF16	P43569	DCV1	YFR012W	609 nt		5.14	□□□□□ -1.59
CAF16	P43569	TFG2	YGR005C	1203 nt		5.14	□□□□□ -1.59
CAF16	P43569	VMA7	YGR020C	357 nt		5.14	□□□□□ -1.59
CAF16	P43569	VMA22	YHR060W	546 nt		5.14	□□□□□ -1.59
CAF16	P43569	FMO1	YHR176W	1299 nt		5.14	□□□□□ -1.59
CAF16	P43569	ASF1	YJL115W	840 nt		5.14	□□□□□ -1.59
CAF16	P43569	IRC25	YLR021W	540 nt		5.14	□□□□□ -1.59
CAF16	P43569	SMD2	YLR275W	333 nt		5.14	□□□□□ -1.59
CAF16	P43569	MRPS17	YMR188C	714 nt		5.14	□□□□□ -1.59
CAF16	P43569	END3	YNL084C	1050 nt		5.14	□□□□□ -1.59
CAF16	P43569	YNL144W-A	YNL144W-A	84 nt		5.14	□□□□□ -1.59
CAF16	P43569	BUD17	YNR027W	954 nt		5.14	□□□□□ -1.59
CAF16	P43569	SRL4	YPL033C	846 nt		5.14	□□□□□ -1.59
CAF16	P43569	snR32	snR32	188 nt		5.14	□□□□□ -1.59
CAF16	P43569	UIP5	YKR044W	1332 nt		5.14	□□□□□ -1.59
CAF16	P43569	SSA2	YLL024C	1920 nt		5.13	□□□□□ -1.59
CAF16	P43569	LEU1	YGL009C	2340 nt		5.13	□□□□□ -1.59
CAF16	P43569	TDA3	YHR009C	1572 nt		5.13	□□□□□ -1.59
CAF16	P43569	AMD2	YDR242W	1650 nt		5.13	□□□□□ -1.59
CAF16	P43569	YCL076W	YCL076W	744 nt		5.13	□□□□□ -1.59
CAF16	P43569	MHF2	YDL160C-A	243 nt		5.13	□□□□□ -1.59
CAF16	P43569	NUS1	YDL193W	1128 nt		5.13	□□□□□ -1.59
CAF16	P43569	SHU2	YDR078C	672 nt		5.13	□□□□□ -1.59
CAF16	P43569	SPT15	YER148W	723 nt		5.13	□□□□□ -1.59
CAF16	P43569	SIP2	YGL208W	1248 nt		5.13	□□□□□ -1.59
CAF16	P43569	YJL032W	YJL032W	315 nt		5.13	□□□□□ -1.59
CAF16	P43569	VPS25	YJR102C	609 nt		5.13	□□□□□ -1.59
CAF16	P43569	YBL068W-A	YBL068W-A	237 nt		5.13	□□□□□ -1.59
CAF16	P43569	MRPS18	YNL306W	654 nt		5.13	□□□□□ -1.59

Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms