Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CPS1P31327 HSCB-202ENST00000398941 955 ntTSL 2 BASIC32.33■■■□□ 2.77
CPS1P31327 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CPS1P31327 TSPY20P-201ENST00000450910 630 ntBASIC32.33■■■□□ 2.77
CPS1P31327 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
CPS1P31327 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.32■■■□□ 2.77
CPS1P31327 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CPS1P31327 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.32■■■□□ 2.76
CPS1P31327 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.32■■■□□ 2.76
CPS1P31327 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC32.31■■■□□ 2.76
CPS1P31327 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
CPS1P31327 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CPS1P31327 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
CPS1P31327 VGF-203ENST00000611537 1622 ntTSL 5 BASIC32.31■■■□□ 2.76
CPS1P31327 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC32.31■■■□□ 2.76
CPS1P31327 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CPS1P31327 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.31■■■□□ 2.76
CPS1P31327 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
CPS1P31327 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
CPS1P31327 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC32.3■■■□□ 2.76
CPS1P31327 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC32.3■■■□□ 2.76
CPS1P31327 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CPS1P31327 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CPS1P31327 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
CPS1P31327 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CPS1P31327 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC32.3■■■□□ 2.76
CPS1P31327 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CPS1P31327 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.29■■■□□ 2.76
CPS1P31327 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CPS1P31327 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
CPS1P31327 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CPS1P31327 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC32.28■■■□□ 2.76
CPS1P31327 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CPS1P31327 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CPS1P31327 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC32.28■■■□□ 2.76
CPS1P31327 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC32.28■■■□□ 2.76
CPS1P31327 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
CPS1P31327 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CPS1P31327 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CPS1P31327 AC093827.2-201ENST00000512654 315 ntBASIC32.27■■■□□ 2.76
CPS1P31327 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC32.27■■■□□ 2.76
CPS1P31327 pRNA.6-201ENST00000610482 90 ntBASIC32.27■■■□□ 2.76
CPS1P31327 pRNA.5-201ENST00000612139 90 ntBASIC32.27■■■□□ 2.76
CPS1P31327 pRNA.11-201ENST00000618423 90 ntBASIC32.27■■■□□ 2.76
CPS1P31327 pRNA.13-201ENST00000619112 90 ntBASIC32.27■■■□□ 2.76
CPS1P31327 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CPS1P31327 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CPS1P31327 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CPS1P31327 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CPS1P31327 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CPS1P31327 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CPS1P31327 BID-214ENST00000617586 542 ntTSL 5 BASIC32.26■■■□□ 2.76
CPS1P31327 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CPS1P31327 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CPS1P31327 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC32.26■■■□□ 2.75
CPS1P31327 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CPS1P31327 MIR663A-201ENST00000385250 93 ntBASIC32.26■■■□□ 2.75
CPS1P31327 APTR-205ENST00000447009 902 ntTSL 2 BASIC32.26■■■□□ 2.75
CPS1P31327 DBI-210ENST00000542275 757 ntTSL 5 BASIC32.26■■■□□ 2.75
CPS1P31327 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC32.26■■■□□ 2.75
CPS1P31327 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.25■■■□□ 2.75
CPS1P31327 SLC6A10P-202ENST00000431994 2058 ntBASIC32.25■■■□□ 2.75
CPS1P31327 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
CPS1P31327 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC32.25■■■□□ 2.75
CPS1P31327 CD37-213ENST00000598095 1598 ntTSL 2 BASIC32.25■■■□□ 2.75
CPS1P31327 STX7-201ENST00000367937 1090 ntTSL 5 BASIC32.25■■■□□ 2.75
CPS1P31327 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CPS1P31327 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CPS1P31327 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CPS1P31327 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
CPS1P31327 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.24■■■□□ 2.75
CPS1P31327 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CPS1P31327 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
CPS1P31327 AC142086.2-201ENST00000569753 217 ntBASIC32.24■■■□□ 2.75
CPS1P31327 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CPS1P31327 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CPS1P31327 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CPS1P31327 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CPS1P31327 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC32.23■■■□□ 2.75
CPS1P31327 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.23■■■□□ 2.75
CPS1P31327 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CPS1P31327 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CPS1P31327 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CPS1P31327 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.22■■■□□ 2.75
CPS1P31327 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
CPS1P31327 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CPS1P31327 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
CPS1P31327 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.22■■■□□ 2.75
CPS1P31327 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC32.22■■■□□ 2.75
CPS1P31327 NKILA-201ENST00000613231 537 ntTSL 4 BASIC32.22■■■□□ 2.75
CPS1P31327 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CPS1P31327 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.22■■■□□ 2.75
CPS1P31327 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC32.22■■■□□ 2.75
CPS1P31327 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CPS1P31327 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC32.21■■■□□ 2.75
CPS1P31327 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
CPS1P31327 WWOX-218ENST00000627394 894 ntTSL 5 BASIC32.21■■■□□ 2.75
CPS1P31327 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
CPS1P31327 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CPS1P31327 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms