Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.55■□□□□ 0.88
SHC1P29353 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SHC1P29353 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SHC1P29353 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SHC1P29353 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.55■□□□□ 0.88
SHC1P29353 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.55■□□□□ 0.88
SHC1P29353 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.55■□□□□ 0.88
SHC1P29353 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.55■□□□□ 0.88
SHC1P29353 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHC1P29353 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHC1P29353 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.54■□□□□ 0.88
SHC1P29353 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC1P29353 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHC1P29353 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.54■□□□□ 0.88
SHC1P29353 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.54■□□□□ 0.88
SHC1P29353 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHC1P29353 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHC1P29353 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHC1P29353 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.53■□□□□ 0.88
SHC1P29353 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC1P29353 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC1P29353 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SHC1P29353 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC1P29353 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.53■□□□□ 0.88
SHC1P29353 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHC1P29353 MIR6724-1-201ENST00000616420 92 ntBASIC20.53■□□□□ 0.88
SHC1P29353 MIR6724-2-201ENST00000616483 92 ntBASIC20.53■□□□□ 0.88
SHC1P29353 MIR6724-4-201ENST00000617390 92 ntBASIC20.53■□□□□ 0.88
SHC1P29353 MIR6724-3-201ENST00000622482 92 ntBASIC20.53■□□□□ 0.88
SHC1P29353 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.53■□□□□ 0.88
SHC1P29353 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.53■□□□□ 0.88
SHC1P29353 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC1P29353 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.53■□□□□ 0.88
SHC1P29353 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC1P29353 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHC1P29353 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.52■□□□□ 0.88
SHC1P29353 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHC1P29353 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC1P29353 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC1P29353 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.52■□□□□ 0.88
SHC1P29353 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHC1P29353 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SHC1P29353 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SHC1P29353 CLDN5-201ENST00000403084 2357 ntBASIC20.51■□□□□ 0.87
SHC1P29353 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC1P29353 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC1P29353 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC1P29353 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC1P29353 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.51■□□□□ 0.87
SHC1P29353 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC1P29353 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC1P29353 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC1P29353 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SHC1P29353 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHC1P29353 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SHC1P29353 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.5■□□□□ 0.87
SHC1P29353 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC1P29353 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC1P29353 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SHC1P29353 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC1P29353 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC1P29353 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC1P29353 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.49■□□□□ 0.87
SHC1P29353 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHC1P29353 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHC1P29353 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC1P29353 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHC1P29353 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
SHC1P29353 AC005703.6-201ENST00000623265 1329 ntBASIC20.49■□□□□ 0.87
SHC1P29353 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.49■□□□□ 0.87
SHC1P29353 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC1P29353 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC1P29353 AL117332.1-201ENST00000622628 974 ntBASIC20.48■□□□□ 0.87
SHC1P29353 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC1P29353 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC1P29353 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC1P29353 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.48■□□□□ 0.87
SHC1P29353 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC1P29353 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.48■□□□□ 0.87
SHC1P29353 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SHC1P29353 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHC1P29353 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHC1P29353 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.47■□□□□ 0.87
SHC1P29353 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHC1P29353 AC131212.1-201ENST00000613771 668 ntBASIC20.47■□□□□ 0.87
SHC1P29353 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms