Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RAP2CP1-201ENST00000605103 478 ntBASIC28.03■■■□□ 2.08
COL11A2P13942 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
COL11A2P13942 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC28.03■■■□□ 2.08
COL11A2P13942 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.03■■■□□ 2.08
COL11A2P13942 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
COL11A2P13942 DUSP8P4-201ENST00000399538 1761 ntBASIC28.02■■■□□ 2.08
COL11A2P13942 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL11A2P13942 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.02■■■□□ 2.08
COL11A2P13942 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
COL11A2P13942 OR2I1P-207ENST00000453522 948 ntBASIC28.02■■■□□ 2.08
COL11A2P13942 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.02■■■□□ 2.08
COL11A2P13942 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.02■■■□□ 2.08
COL11A2P13942 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
COL11A2P13942 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.02■■■□□ 2.08
COL11A2P13942 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.02■■■□□ 2.08
COL11A2P13942 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL11A2P13942 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL11A2P13942 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL11A2P13942 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.01■■■□□ 2.07
COL11A2P13942 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.01■■■□□ 2.07
COL11A2P13942 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL11A2P13942 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
COL11A2P13942 AC133637.1-201ENST00000624115 1537 ntBASIC28.01■■■□□ 2.07
COL11A2P13942 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL11A2P13942 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC28.01■■■□□ 2.07
COL11A2P13942 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.01■■■□□ 2.07
COL11A2P13942 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL11A2P13942 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28■■■□□ 2.07
COL11A2P13942 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28■■■□□ 2.07
COL11A2P13942 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
COL11A2P13942 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
COL11A2P13942 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28■■■□□ 2.07
COL11A2P13942 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28■■■□□ 2.07
COL11A2P13942 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COL11A2P13942 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.99■■■□□ 2.07
COL11A2P13942 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.99■■■□□ 2.07
COL11A2P13942 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC27.99■■■□□ 2.07
COL11A2P13942 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
COL11A2P13942 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.99■■■□□ 2.07
COL11A2P13942 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
COL11A2P13942 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COL11A2P13942 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.99■■■□□ 2.07
COL11A2P13942 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
COL11A2P13942 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
COL11A2P13942 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL11A2P13942 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
COL11A2P13942 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC27.98■■■□□ 2.07
COL11A2P13942 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.98■■■□□ 2.07
COL11A2P13942 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.98■■■□□ 2.07
COL11A2P13942 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
COL11A2P13942 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.98■■■□□ 2.07
COL11A2P13942 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.98■■■□□ 2.07
COL11A2P13942 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.98■■■□□ 2.07
COL11A2P13942 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.98■■■□□ 2.07
COL11A2P13942 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL11A2P13942 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL11A2P13942 ALDH1A3-203ENST00000557963 1670 ntBASIC27.98■■■□□ 2.07
COL11A2P13942 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL11A2P13942 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
COL11A2P13942 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL11A2P13942 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.98■■■□□ 2.07
COL11A2P13942 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.97■■■□□ 2.07
COL11A2P13942 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
COL11A2P13942 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL11A2P13942 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL11A2P13942 AL121749.1-202ENST00000609313 2153 ntBASIC27.97■■■□□ 2.07
COL11A2P13942 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.97■■■□□ 2.07
COL11A2P13942 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.97■■■□□ 2.07
COL11A2P13942 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.97■■■□□ 2.07
COL11A2P13942 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL11A2P13942 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.97■■■□□ 2.07
COL11A2P13942 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL11A2P13942 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL11A2P13942 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL11A2P13942 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL11A2P13942 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
COL11A2P13942 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.96■■■□□ 2.07
COL11A2P13942 AL161729.1-201ENST00000604104 1402 ntBASIC27.96■■■□□ 2.07
COL11A2P13942 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
COL11A2P13942 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC27.95■■■□□ 2.07
COL11A2P13942 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
COL11A2P13942 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
COL11A2P13942 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
COL11A2P13942 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.95■■■□□ 2.07
COL11A2P13942 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.95■■■□□ 2.07
COL11A2P13942 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.95■■■□□ 2.07
COL11A2P13942 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC27.95■■■□□ 2.06
COL11A2P13942 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
COL11A2P13942 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
COL11A2P13942 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.94■■■□□ 2.06
COL11A2P13942 NTF6G-201ENST00000591094 616 ntBASIC27.94■■■□□ 2.06
COL11A2P13942 AL499627.2-201ENST00000606283 725 ntBASIC27.94■■■□□ 2.06
COL11A2P13942 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
COL11A2P13942 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL11A2P13942 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
COL11A2P13942 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
COL11A2P13942 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL11A2P13942 HLA-L-211ENST00000482052 1765 ntBASIC27.93■■■□□ 2.06
COL11A2P13942 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL11A2P13942 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms