Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 OR2I1P-207ENST00000453522 948 ntBASIC23.05■■□□□ 1.28
COL4A2P08572 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
COL4A2P08572 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.05■■□□□ 1.28
COL4A2P08572 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.05■■□□□ 1.28
COL4A2P08572 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL4A2P08572 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.05■■□□□ 1.28
COL4A2P08572 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
COL4A2P08572 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL4A2P08572 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
COL4A2P08572 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 AC091060.1-201ENST00000623524 1766 ntBASIC23.04■■□□□ 1.28
COL4A2P08572 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
COL4A2P08572 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.04■■□□□ 1.28
COL4A2P08572 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.04■■□□□ 1.28
COL4A2P08572 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
COL4A2P08572 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A2P08572 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.03■■□□□ 1.28
COL4A2P08572 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A2P08572 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.03■■□□□ 1.28
COL4A2P08572 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A2P08572 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
COL4A2P08572 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.03■■□□□ 1.28
COL4A2P08572 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.03■■□□□ 1.28
COL4A2P08572 AL499627.2-201ENST00000606283 725 ntBASIC23.03■■□□□ 1.28
COL4A2P08572 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
COL4A2P08572 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A2P08572 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.03■■□□□ 1.28
COL4A2P08572 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A2P08572 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A2P08572 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A2P08572 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.02■■□□□ 1.28
COL4A2P08572 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.02■■□□□ 1.28
COL4A2P08572 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A2P08572 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A2P08572 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
COL4A2P08572 AC133637.1-201ENST00000624115 1537 ntBASIC23.02■■□□□ 1.28
COL4A2P08572 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A2P08572 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A2P08572 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A2P08572 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.02■■□□□ 1.27
COL4A2P08572 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
COL4A2P08572 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.01■■□□□ 1.27
COL4A2P08572 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A2P08572 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.01■■□□□ 1.27
COL4A2P08572 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.01■■□□□ 1.27
COL4A2P08572 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL4A2P08572 AC145676.1-201ENST00000514988 2004 ntBASIC23.01■■□□□ 1.27
COL4A2P08572 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A2P08572 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
COL4A2P08572 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL4A2P08572 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
COL4A2P08572 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23■■□□□ 1.27
COL4A2P08572 AC004911.1-201ENST00000416316 871 ntBASIC23■■□□□ 1.27
COL4A2P08572 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23■■□□□ 1.27
COL4A2P08572 KRT18P61-201ENST00000585825 1298 ntBASIC23■■□□□ 1.27
COL4A2P08572 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL4A2P08572 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL4A2P08572 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23■■□□□ 1.27
COL4A2P08572 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23■■□□□ 1.27
COL4A2P08572 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL4A2P08572 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL4A2P08572 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL4A2P08572 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
COL4A2P08572 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.99■■□□□ 1.27
COL4A2P08572 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.99■■□□□ 1.27
COL4A2P08572 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.99■■□□□ 1.27
COL4A2P08572 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.99■■□□□ 1.27
COL4A2P08572 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL4A2P08572 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.99■■□□□ 1.27
COL4A2P08572 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
COL4A2P08572 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.99■■□□□ 1.27
COL4A2P08572 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.99■■□□□ 1.27
COL4A2P08572 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
COL4A2P08572 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.98■■□□□ 1.27
COL4A2P08572 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.98■■□□□ 1.27
COL4A2P08572 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL4A2P08572 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
COL4A2P08572 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL4A2P08572 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL4A2P08572 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL4A2P08572 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL4A2P08572 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.98■■□□□ 1.27
COL4A2P08572 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.98■■□□□ 1.27
COL4A2P08572 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL4A2P08572 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
COL4A2P08572 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL4A2P08572 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL4A2P08572 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL4A2P08572 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.97■■□□□ 1.27
COL4A2P08572 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.97■■□□□ 1.27
COL4A2P08572 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.97■■□□□ 1.27
COL4A2P08572 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms