Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RB1P06400 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.07■■□□□ 1.44
RB1P06400 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.07■■□□□ 1.44
RB1P06400 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.07■■□□□ 1.44
RB1P06400 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.07■■□□□ 1.44
RB1P06400 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
RB1P06400 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.07■■□□□ 1.44
RB1P06400 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.07■■□□□ 1.44
RB1P06400 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
RB1P06400 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RB1P06400 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.06■■□□□ 1.44
RB1P06400 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RB1P06400 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.06■■□□□ 1.44
RB1P06400 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RB1P06400 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RB1P06400 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.05■■□□□ 1.44
RB1P06400 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RB1P06400 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RB1P06400 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
RB1P06400 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.05■■□□□ 1.44
RB1P06400 AL499627.2-201ENST00000606283 725 ntBASIC24.05■■□□□ 1.44
RB1P06400 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RB1P06400 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
RB1P06400 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.05■■□□□ 1.44
RB1P06400 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.05■■□□□ 1.44
RB1P06400 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RB1P06400 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RB1P06400 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.04■■□□□ 1.44
RB1P06400 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RB1P06400 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.04■■□□□ 1.44
RB1P06400 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.04■■□□□ 1.44
RB1P06400 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.04■■□□□ 1.44
RB1P06400 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RB1P06400 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.03■■□□□ 1.44
RB1P06400 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
RB1P06400 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.03■■□□□ 1.44
RB1P06400 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RB1P06400 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.02■■□□□ 1.44
RB1P06400 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.02■■□□□ 1.44
RB1P06400 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
RB1P06400 OR2I1P-207ENST00000453522 948 ntBASIC24.02■■□□□ 1.44
RB1P06400 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.02■■□□□ 1.44
RB1P06400 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
RB1P06400 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RB1P06400 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.01■■□□□ 1.43
RB1P06400 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.01■■□□□ 1.43
RB1P06400 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RB1P06400 DUSP8P4-201ENST00000399538 1761 ntBASIC24.01■■□□□ 1.43
RB1P06400 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RB1P06400 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RB1P06400 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.01■■□□□ 1.43
RB1P06400 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RB1P06400 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RB1P06400 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RB1P06400 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RB1P06400 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RB1P06400 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24■■□□□ 1.43
RB1P06400 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24■■□□□ 1.43
RB1P06400 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24■■□□□ 1.43
RB1P06400 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24■■□□□ 1.43
RB1P06400 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24■■□□□ 1.43
RB1P06400 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24■■□□□ 1.43
RB1P06400 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RB1P06400 AP005435.1-201ENST00000529293 1178 ntBASIC23.99■■□□□ 1.43
RB1P06400 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RB1P06400 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RB1P06400 HLA-L-211ENST00000482052 1765 ntBASIC23.98■■□□□ 1.43
RB1P06400 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RB1P06400 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.98■■□□□ 1.43
RB1P06400 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RB1P06400 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms