Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GYPBP06028 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
GYPBP06028 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.16■□□□□ 0.82
GYPBP06028 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GYPBP06028 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GYPBP06028 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GYPBP06028 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GYPBP06028 MIR4281-201ENST00000580852 62 ntBASIC20.15■□□□□ 0.82
GYPBP06028 THA1P-201ENST00000590384 1145 ntBASIC20.15■□□□□ 0.82
GYPBP06028 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GYPBP06028 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GYPBP06028 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GYPBP06028 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GYPBP06028 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
GYPBP06028 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.14■□□□□ 0.82
GYPBP06028 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GYPBP06028 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GYPBP06028 AC079630.1-202ENST00000618127 1840 ntBASIC20.14■□□□□ 0.81
GYPBP06028 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.14■□□□□ 0.81
GYPBP06028 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GYPBP06028 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.14■□□□□ 0.81
GYPBP06028 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.14■□□□□ 0.81
GYPBP06028 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GYPBP06028 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GYPBP06028 GUSBP5-202ENST00000510805 1989 ntBASIC20.14■□□□□ 0.81
GYPBP06028 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
GYPBP06028 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.13■□□□□ 0.81
GYPBP06028 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.13■□□□□ 0.81
GYPBP06028 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.13■□□□□ 0.81
GYPBP06028 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.13■□□□□ 0.81
GYPBP06028 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.13■□□□□ 0.81
GYPBP06028 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GYPBP06028 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.12■□□□□ 0.81
GYPBP06028 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.12■□□□□ 0.81
GYPBP06028 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.12■□□□□ 0.81
GYPBP06028 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GYPBP06028 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GYPBP06028 LINC00565-201ENST00000562710 2331 ntBASIC20.11■□□□□ 0.81
GYPBP06028 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GYPBP06028 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.11■□□□□ 0.81
GYPBP06028 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.11■□□□□ 0.81
GYPBP06028 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GYPBP06028 KRT18P24-201ENST00000344739 1156 ntBASIC20.11■□□□□ 0.81
GYPBP06028 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.11■□□□□ 0.81
GYPBP06028 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GYPBP06028 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GYPBP06028 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GYPBP06028 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
GYPBP06028 TSPY13P-201ENST00000338964 914 ntBASIC20.1■□□□□ 0.81
GYPBP06028 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
GYPBP06028 CLDN5-201ENST00000403084 2357 ntBASIC20.1■□□□□ 0.81
GYPBP06028 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.1■□□□□ 0.81
GYPBP06028 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GYPBP06028 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GYPBP06028 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GYPBP06028 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
GYPBP06028 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GYPBP06028 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GYPBP06028 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
GYPBP06028 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
GYPBP06028 AC074183.2-201ENST00000623112 922 ntBASIC20.09■□□□□ 0.81
GYPBP06028 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GYPBP06028 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GYPBP06028 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GYPBP06028 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GYPBP06028 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.08■□□□□ 0.81
GYPBP06028 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GYPBP06028 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GYPBP06028 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.08■□□□□ 0.81
GYPBP06028 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GYPBP06028 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
GYPBP06028 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
GYPBP06028 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GYPBP06028 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GYPBP06028 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.08■□□□□ 0.81
GYPBP06028 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GYPBP06028 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
GYPBP06028 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
GYPBP06028 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GYPBP06028 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GYPBP06028 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
GYPBP06028 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GYPBP06028 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GYPBP06028 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
GYPBP06028 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.07■□□□□ 0.8
GYPBP06028 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms