Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LCATP04180 MIR6722-201ENST00000617286 78 ntBASIC19.61■□□□□ 0.73
LCATP04180 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.61■□□□□ 0.73
LCATP04180 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 AC092068.2-201ENST00000590491 1708 ntBASIC19.61■□□□□ 0.73
LCATP04180 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LCATP04180 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.61■□□□□ 0.73
LCATP04180 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
LCATP04180 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCATP04180 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LCATP04180 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCATP04180 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.6■□□□□ 0.73
LCATP04180 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.6■□□□□ 0.73
LCATP04180 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LCATP04180 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.6■□□□□ 0.73
LCATP04180 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.6■□□□□ 0.73
LCATP04180 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCATP04180 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCATP04180 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LCATP04180 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.6■□□□□ 0.73
LCATP04180 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCATP04180 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LCATP04180 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCATP04180 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCATP04180 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCATP04180 AC005703.6-201ENST00000623265 1329 ntBASIC19.59■□□□□ 0.73
LCATP04180 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCATP04180 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.59■□□□□ 0.73
LCATP04180 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LCATP04180 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.59■□□□□ 0.73
LCATP04180 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCATP04180 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LCATP04180 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LCATP04180 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCATP04180 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
LCATP04180 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LCATP04180 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LCATP04180 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LCATP04180 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCATP04180 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
LCATP04180 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCATP04180 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LCATP04180 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LCATP04180 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCATP04180 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.58■□□□□ 0.72
LCATP04180 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LCATP04180 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LCATP04180 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCATP04180 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LCATP04180 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCATP04180 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LCATP04180 MTDHP2-201ENST00000601468 714 ntBASIC19.57■□□□□ 0.72
LCATP04180 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.57■□□□□ 0.72
LCATP04180 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCATP04180 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LCATP04180 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LCATP04180 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.57■□□□□ 0.72
LCATP04180 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.56■□□□□ 0.72
LCATP04180 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
LCATP04180 TSPY9P-201ENST00000440215 945 ntBASIC19.56■□□□□ 0.72
LCATP04180 TSPY11P-201ENST00000442607 1045 ntBASIC19.56■□□□□ 0.72
LCATP04180 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCATP04180 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.56■□□□□ 0.72
LCATP04180 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LCATP04180 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
LCATP04180 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LCATP04180 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.55■□□□□ 0.72
LCATP04180 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LCATP04180 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.55■□□□□ 0.72
LCATP04180 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.55■□□□□ 0.72
LCATP04180 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.55■□□□□ 0.72
LCATP04180 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.55■□□□□ 0.72
LCATP04180 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.55■□□□□ 0.72
LCATP04180 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.55■□□□□ 0.72
LCATP04180 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LCATP04180 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 C9orf163-202ENST00000624034 2573 ntBASIC19.55■□□□□ 0.72
LCATP04180 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCATP04180 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
LCATP04180 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCATP04180 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCATP04180 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.54■□□□□ 0.72
LCATP04180 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCATP04180 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LCATP04180 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms