Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN1O95832 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN1O95832 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN1O95832 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN1O95832 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN1O95832 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN1O95832 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN1O95832 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN1O95832 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN1O95832 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN1O95832 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN1O95832 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLDN1O95832 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.04■□□□□ 0.8
CLDN1O95832 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN1O95832 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN1O95832 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.04■□□□□ 0.8
CLDN1O95832 AC009086.3-201ENST00000623486 1008 ntBASIC20.04■□□□□ 0.8
CLDN1O95832 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN1O95832 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN1O95832 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLDN1O95832 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN1O95832 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN1O95832 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN1O95832 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLDN1O95832 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CLDN1O95832 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN1O95832 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLDN1O95832 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN1O95832 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN1O95832 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN1O95832 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN1O95832 KRT18P14-201ENST00000534205 1250 ntBASIC20.02■□□□□ 0.8
CLDN1O95832 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN1O95832 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN1O95832 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN1O95832 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLDN1O95832 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN1O95832 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN1O95832 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLDN1O95832 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN1O95832 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN1O95832 AC012414.1-201ENST00000556676 535 ntBASIC20.01■□□□□ 0.79
CLDN1O95832 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN1O95832 AC080038.1-201ENST00000611274 1154 ntBASIC20.01■□□□□ 0.79
CLDN1O95832 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN1O95832 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN1O95832 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN1O95832 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20■□□□□ 0.79
CLDN1O95832 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN1O95832 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN1O95832 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLDN1O95832 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN1O95832 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20■□□□□ 0.79
CLDN1O95832 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20■□□□□ 0.79
CLDN1O95832 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN1O95832 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLDN1O95832 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20■□□□□ 0.79
CLDN1O95832 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLDN1O95832 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CLDN1O95832 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN1O95832 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.99■□□□□ 0.79
CLDN1O95832 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN1O95832 TMEM191A-211ENST00000637163 1067 ntBASIC19.99■□□□□ 0.79
CLDN1O95832 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN1O95832 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN1O95832 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CLDN1O95832 AC131274.2-201ENST00000580697 1507 ntBASIC19.98■□□□□ 0.79
CLDN1O95832 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CLDN1O95832 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN1O95832 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN1O95832 MIR572-201ENST00000384983 95 ntBASIC19.98■□□□□ 0.79
CLDN1O95832 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN1O95832 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN1O95832 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN1O95832 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN1O95832 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN1O95832 TERF1P2-201ENST00000583350 1212 ntBASIC19.98■□□□□ 0.79
CLDN1O95832 RAP2CP1-201ENST00000605103 478 ntBASIC19.98■□□□□ 0.79
CLDN1O95832 AL354811.1-201ENST00000610286 706 ntBASIC19.98■□□□□ 0.79
CLDN1O95832 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN1O95832 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLDN1O95832 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLDN1O95832 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN1O95832 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms