Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS3O75489 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.4■■□□□ 1.18
NDUFS3O75489 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS3O75489 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS3O75489 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NDUFS3O75489 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
NDUFS3O75489 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.39■■□□□ 1.18
NDUFS3O75489 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
NDUFS3O75489 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS3O75489 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS3O75489 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.39■■□□□ 1.17
NDUFS3O75489 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS3O75489 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS3O75489 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.39■■□□□ 1.17
NDUFS3O75489 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.39■■□□□ 1.17
NDUFS3O75489 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.38■■□□□ 1.17
NDUFS3O75489 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.38■■□□□ 1.17
NDUFS3O75489 AC010997.5-201ENST00000609182 354 ntBASIC22.38■■□□□ 1.17
NDUFS3O75489 AL035685.1-201ENST00000636663 812 ntBASIC22.38■■□□□ 1.17
NDUFS3O75489 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS3O75489 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NDUFS3O75489 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NDUFS3O75489 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDUFS3O75489 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.37■■□□□ 1.17
NDUFS3O75489 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDUFS3O75489 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NDUFS3O75489 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
NDUFS3O75489 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.37■■□□□ 1.17
NDUFS3O75489 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDUFS3O75489 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS3O75489 AC079630.1-202ENST00000618127 1840 ntBASIC22.36■■□□□ 1.17
NDUFS3O75489 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS3O75489 DUSP8P3-201ENST00000399571 1760 ntBASIC22.36■■□□□ 1.17
NDUFS3O75489 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS3O75489 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.36■■□□□ 1.17
NDUFS3O75489 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
NDUFS3O75489 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.36■■□□□ 1.17
NDUFS3O75489 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.36■■□□□ 1.17
NDUFS3O75489 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.36■■□□□ 1.17
NDUFS3O75489 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.36■■□□□ 1.17
NDUFS3O75489 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS3O75489 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS3O75489 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.35■■□□□ 1.17
NDUFS3O75489 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.35■■□□□ 1.17
NDUFS3O75489 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.35■■□□□ 1.17
NDUFS3O75489 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS3O75489 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS3O75489 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS3O75489 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS3O75489 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.35■■□□□ 1.17
NDUFS3O75489 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.35■■□□□ 1.17
NDUFS3O75489 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS3O75489 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
NDUFS3O75489 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.34■■□□□ 1.17
NDUFS3O75489 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.34■■□□□ 1.17
NDUFS3O75489 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS3O75489 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
NDUFS3O75489 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
NDUFS3O75489 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NDUFS3O75489 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NDUFS3O75489 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.33■■□□□ 1.17
NDUFS3O75489 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
NDUFS3O75489 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
NDUFS3O75489 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
NDUFS3O75489 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NDUFS3O75489 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NDUFS3O75489 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
NDUFS3O75489 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.33■■□□□ 1.16
NDUFS3O75489 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.32■■□□□ 1.16
NDUFS3O75489 C9orf163-202ENST00000624034 2573 ntBASIC22.32■■□□□ 1.16
NDUFS3O75489 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS3O75489 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.32■■□□□ 1.16
NDUFS3O75489 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
NDUFS3O75489 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS3O75489 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
NDUFS3O75489 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS3O75489 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS3O75489 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS3O75489 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS3O75489 AC068473.5-201ENST00000616428 2072 ntBASIC22.31■■□□□ 1.16
NDUFS3O75489 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS3O75489 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.31■■□□□ 1.16
NDUFS3O75489 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
NDUFS3O75489 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.31■■□□□ 1.16
NDUFS3O75489 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS3O75489 UNC93B8-201ENST00000511903 705 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms