Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCNT1O60563 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
CCNT1O60563 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.59■■□□□ 1.69
CCNT1O60563 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CCNT1O60563 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.59■■□□□ 1.69
CCNT1O60563 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.59■■□□□ 1.69
CCNT1O60563 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNT1O60563 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CCNT1O60563 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNT1O60563 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNT1O60563 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CCNT1O60563 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNT1O60563 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCNT1O60563 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCNT1O60563 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCNT1O60563 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.58■■□□□ 1.69
CCNT1O60563 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.58■■□□□ 1.69
CCNT1O60563 AC079630.1-202ENST00000618127 1840 ntBASIC25.58■■□□□ 1.68
CCNT1O60563 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CCNT1O60563 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CCNT1O60563 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.57■■□□□ 1.68
CCNT1O60563 AL512631.2-201ENST00000604634 923 ntBASIC25.57■■□□□ 1.68
CCNT1O60563 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCNT1O60563 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCNT1O60563 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CCNT1O60563 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.57■■□□□ 1.68
CCNT1O60563 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCNT1O60563 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.56■■□□□ 1.68
CCNT1O60563 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.56■■□□□ 1.68
CCNT1O60563 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCNT1O60563 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCNT1O60563 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCNT1O60563 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNT1O60563 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNT1O60563 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.55■■□□□ 1.68
CCNT1O60563 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.55■■□□□ 1.68
CCNT1O60563 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.55■■□□□ 1.68
CCNT1O60563 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.55■■□□□ 1.68
CCNT1O60563 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNT1O60563 C17orf82-201ENST00000623772 1530 ntBASIC25.54■■□□□ 1.68
CCNT1O60563 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCNT1O60563 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CCNT1O60563 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCNT1O60563 AC131281.2-201ENST00000520478 145 ntBASIC25.54■■□□□ 1.68
CCNT1O60563 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCNT1O60563 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.54■■□□□ 1.68
CCNT1O60563 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
CCNT1O60563 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCNT1O60563 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CCNT1O60563 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCNT1O60563 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCNT1O60563 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.53■■□□□ 1.68
CCNT1O60563 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCNT1O60563 AC092068.2-201ENST00000590491 1708 ntBASIC25.53■■□□□ 1.68
CCNT1O60563 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCNT1O60563 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
CCNT1O60563 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCNT1O60563 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCNT1O60563 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CCNT1O60563 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNT1O60563 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CCNT1O60563 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
CCNT1O60563 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.52■■□□□ 1.68
CCNT1O60563 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.52■■□□□ 1.68
CCNT1O60563 MIR4466-201ENST00000606121 54 ntBASIC25.52■■□□□ 1.68
CCNT1O60563 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNT1O60563 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNT1O60563 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNT1O60563 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.52■■□□□ 1.68
CCNT1O60563 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.68
CCNT1O60563 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.51■■□□□ 1.67
CCNT1O60563 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNT1O60563 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.51■■□□□ 1.67
CCNT1O60563 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
CCNT1O60563 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.51■■□□□ 1.67
CCNT1O60563 AC144652.1-201ENST00000609974 1624 ntBASIC25.51■■□□□ 1.67
CCNT1O60563 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.51■■□□□ 1.67
CCNT1O60563 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCNT1O60563 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
CCNT1O60563 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCNT1O60563 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCNT1O60563 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CCNT1O60563 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCNT1O60563 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCNT1O60563 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CCNT1O60563 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCNT1O60563 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.5■■□□□ 1.67
CCNT1O60563 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.5■■□□□ 1.67
CCNT1O60563 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNT1O60563 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNT1O60563 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms