Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 MIR6089-201ENST00000616698 64 ntBASIC24.79■■□□□ 1.56
NCK2O43639 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NCK2O43639 AC012676.1-201ENST00000574705 1949 ntBASIC24.78■■□□□ 1.56
NCK2O43639 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NCK2O43639 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NCK2O43639 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.78■■□□□ 1.56
NCK2O43639 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.78■■□□□ 1.56
NCK2O43639 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.78■■□□□ 1.56
NCK2O43639 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NCK2O43639 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCK2O43639 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.77■■□□□ 1.56
NCK2O43639 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCK2O43639 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
NCK2O43639 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NCK2O43639 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.77■■□□□ 1.56
NCK2O43639 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.77■■□□□ 1.56
NCK2O43639 AC092171.4-201ENST00000609130 632 ntBASIC24.77■■□□□ 1.56
NCK2O43639 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NCK2O43639 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NCK2O43639 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.76■■□□□ 1.55
NCK2O43639 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.76■■□□□ 1.55
NCK2O43639 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.76■■□□□ 1.55
NCK2O43639 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NCK2O43639 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
NCK2O43639 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NCK2O43639 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NCK2O43639 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NCK2O43639 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
NCK2O43639 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NCK2O43639 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.74■■□□□ 1.55
NCK2O43639 AP001330.3-201ENST00000520123 633 ntBASIC24.74■■□□□ 1.55
NCK2O43639 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
NCK2O43639 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NCK2O43639 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.74■■□□□ 1.55
NCK2O43639 DUSP8P5-201ENST00000422884 1815 ntBASIC24.74■■□□□ 1.55
NCK2O43639 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.74■■□□□ 1.55
NCK2O43639 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.73■■□□□ 1.55
NCK2O43639 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NCK2O43639 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NCK2O43639 HLA-L-211ENST00000482052 1765 ntBASIC24.73■■□□□ 1.55
NCK2O43639 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.73■■□□□ 1.55
NCK2O43639 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.73■■□□□ 1.55
NCK2O43639 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.73■■□□□ 1.55
NCK2O43639 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.73■■□□□ 1.55
NCK2O43639 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.73■■□□□ 1.55
NCK2O43639 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NCK2O43639 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NCK2O43639 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NCK2O43639 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.72■■□□□ 1.55
NCK2O43639 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.72■■□□□ 1.55
NCK2O43639 FOXO3B-201ENST00000395675 1928 ntBASIC24.72■■□□□ 1.55
NCK2O43639 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NCK2O43639 C9orf163-202ENST00000624034 2573 ntBASIC24.71■■□□□ 1.55
NCK2O43639 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
NCK2O43639 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.71■■□□□ 1.55
NCK2O43639 AL162430.1-201ENST00000480705 870 ntBASIC24.71■■□□□ 1.55
NCK2O43639 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.71■■□□□ 1.55
NCK2O43639 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.71■■□□□ 1.55
NCK2O43639 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NCK2O43639 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
NCK2O43639 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
NCK2O43639 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
NCK2O43639 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.7■■□□□ 1.54
NCK2O43639 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.7■■□□□ 1.54
NCK2O43639 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
NCK2O43639 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NCK2O43639 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.7■■□□□ 1.54
NCK2O43639 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NCK2O43639 AC090877.2-201ENST00000558441 1738 ntBASIC24.69■■□□□ 1.54
NCK2O43639 RASA4CP-201ENST00000424092 1398 ntBASIC24.69■■□□□ 1.54
NCK2O43639 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCK2O43639 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCK2O43639 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.69■■□□□ 1.54
NCK2O43639 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NCK2O43639 AC087623.3-201ENST00000607047 1098 ntBASIC24.69■■□□□ 1.54
NCK2O43639 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NCK2O43639 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.69■■□□□ 1.54
NCK2O43639 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NCK2O43639 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.68■■□□□ 1.54
NCK2O43639 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NCK2O43639 SYT6-210ENST00000641643 1587 ntBASIC24.68■■□□□ 1.54
NCK2O43639 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
NCK2O43639 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
NCK2O43639 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NCK2O43639 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.68■■□□□ 1.54
NCK2O43639 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.68■■□□□ 1.54
NCK2O43639 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
NCK2O43639 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
NCK2O43639 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
NCK2O43639 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
NCK2O43639 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCK2O43639 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCK2O43639 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.67■■□□□ 1.54
NCK2O43639 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
NCK2O43639 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms