Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.96■■□□□ 1.91
FOXN1O15353 AC073111.5-205ENST00000641717 521 ntBASIC26.96■■□□□ 1.91
FOXN1O15353 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.96■■□□□ 1.91
FOXN1O15353 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.95■■□□□ 1.91
FOXN1O15353 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
FOXN1O15353 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
FOXN1O15353 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
FOXN1O15353 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.95■■□□□ 1.9
FOXN1O15353 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.95■■□□□ 1.9
FOXN1O15353 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.95■■□□□ 1.9
FOXN1O15353 AL109923.1-201ENST00000618799 583 ntBASIC26.95■■□□□ 1.9
FOXN1O15353 MIR6084-201ENST00000622012 110 ntBASIC26.95■■□□□ 1.9
FOXN1O15353 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.95■■□□□ 1.9
FOXN1O15353 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
FOXN1O15353 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.95■■□□□ 1.9
FOXN1O15353 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
FOXN1O15353 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
FOXN1O15353 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
FOXN1O15353 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
FOXN1O15353 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
FOXN1O15353 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
FOXN1O15353 AL358852.1-201ENST00000623174 1268 ntBASIC26.94■■□□□ 1.9
FOXN1O15353 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.94■■□□□ 1.9
FOXN1O15353 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.94■■□□□ 1.9
FOXN1O15353 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.94■■□□□ 1.9
FOXN1O15353 AC093323.1-202ENST00000635031 2045 ntBASIC26.94■■□□□ 1.9
FOXN1O15353 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.93■■□□□ 1.9
FOXN1O15353 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
FOXN1O15353 AC005703.6-201ENST00000623265 1329 ntBASIC26.93■■□□□ 1.9
FOXN1O15353 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.93■■□□□ 1.9
FOXN1O15353 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
FOXN1O15353 AC142381.3-201ENST00000568208 1670 ntBASIC26.93■■□□□ 1.9
FOXN1O15353 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
FOXN1O15353 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.93■■□□□ 1.9
FOXN1O15353 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.93■■□□□ 1.9
FOXN1O15353 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
FOXN1O15353 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
FOXN1O15353 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
FOXN1O15353 KRT18P14-201ENST00000534205 1250 ntBASIC26.92■■□□□ 1.9
FOXN1O15353 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.92■■□□□ 1.9
FOXN1O15353 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
FOXN1O15353 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
FOXN1O15353 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.91■■□□□ 1.9
FOXN1O15353 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
FOXN1O15353 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
FOXN1O15353 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.91■■□□□ 1.9
FOXN1O15353 AC026185.1-201ENST00000445748 174 ntBASIC26.91■■□□□ 1.9
FOXN1O15353 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.91■■□□□ 1.9
FOXN1O15353 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.91■■□□□ 1.9
FOXN1O15353 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
FOXN1O15353 AL499627.2-201ENST00000606283 725 ntBASIC26.91■■□□□ 1.9
FOXN1O15353 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.91■■□□□ 1.9
FOXN1O15353 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.91■■□□□ 1.9
FOXN1O15353 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.91■■□□□ 1.9
FOXN1O15353 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.9■■□□□ 1.9
FOXN1O15353 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.9■■□□□ 1.9
FOXN1O15353 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
FOXN1O15353 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
FOXN1O15353 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
FOXN1O15353 TSPY26P-201ENST00000476365 1326 ntBASIC26.9■■□□□ 1.9
FOXN1O15353 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
FOXN1O15353 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
FOXN1O15353 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
FOXN1O15353 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.89■■□□□ 1.9
FOXN1O15353 AC126544.1-201ENST00000580842 1059 ntBASIC26.89■■□□□ 1.9
FOXN1O15353 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
FOXN1O15353 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
FOXN1O15353 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
FOXN1O15353 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.88■■□□□ 1.89
FOXN1O15353 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
FOXN1O15353 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.88■■□□□ 1.89
FOXN1O15353 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
FOXN1O15353 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
FOXN1O15353 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
FOXN1O15353 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
FOXN1O15353 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
FOXN1O15353 AC006015.1-201ENST00000429970 570 ntBASIC26.87■■□□□ 1.89
FOXN1O15353 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
FOXN1O15353 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
FOXN1O15353 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
FOXN1O15353 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
FOXN1O15353 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
FOXN1O15353 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FOXN1O15353 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FOXN1O15353 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FOXN1O15353 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.86■■□□□ 1.89
FOXN1O15353 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.86■■□□□ 1.89
FOXN1O15353 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FOXN1O15353 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
FOXN1O15353 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
FOXN1O15353 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.85■■□□□ 1.89
FOXN1O15353 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.85■■□□□ 1.89
FOXN1O15353 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
FOXN1O15353 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
FOXN1O15353 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
FOXN1O15353 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
FOXN1O15353 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms