Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHL1O00533 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC29.16■■■□□ 2.26
CHL1O00533 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHL1O00533 FP325331.1-202ENST00000623531 1380 ntBASIC29.15■■■□□ 2.26
CHL1O00533 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHL1O00533 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.15■■■□□ 2.26
CHL1O00533 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.15■■■□□ 2.26
CHL1O00533 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHL1O00533 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHL1O00533 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHL1O00533 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHL1O00533 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHL1O00533 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.14■■■□□ 2.26
CHL1O00533 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.14■■■□□ 2.26
CHL1O00533 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.14■■■□□ 2.26
CHL1O00533 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.25
CHL1O00533 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC29.14■■■□□ 2.25
CHL1O00533 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHL1O00533 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHL1O00533 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CHL1O00533 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHL1O00533 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHL1O00533 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHL1O00533 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CHL1O00533 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.13■■■□□ 2.25
CHL1O00533 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC29.13■■■□□ 2.25
CHL1O00533 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.13■■■□□ 2.25
CHL1O00533 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.13■■■□□ 2.25
CHL1O00533 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHL1O00533 AC144652.1-201ENST00000609974 1624 ntBASIC29.12■■■□□ 2.25
CHL1O00533 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHL1O00533 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHL1O00533 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.12■■■□□ 2.25
CHL1O00533 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHL1O00533 SUDS3P1-201ENST00000505831 966 ntBASIC29.12■■■□□ 2.25
CHL1O00533 AC011298.3-201ENST00000615796 283 ntBASIC29.12■■■□□ 2.25
CHL1O00533 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
CHL1O00533 AC019069.1-201ENST00000610008 1333 ntBASIC29.12■■■□□ 2.25
CHL1O00533 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHL1O00533 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.12■■■□□ 2.25
CHL1O00533 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CHL1O00533 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CHL1O00533 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
CHL1O00533 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.11■■■□□ 2.25
CHL1O00533 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.11■■■□□ 2.25
CHL1O00533 DUX4L4-201ENST00000566884 1269 ntBASIC29.11■■■□□ 2.25
CHL1O00533 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.11■■■□□ 2.25
CHL1O00533 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHL1O00533 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.11■■■□□ 2.25
CHL1O00533 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHL1O00533 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHL1O00533 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHL1O00533 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHL1O00533 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.1■■■□□ 2.25
CHL1O00533 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHL1O00533 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHL1O00533 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.1■■■□□ 2.25
CHL1O00533 AC093323.1-202ENST00000635031 2045 ntBASIC29.1■■■□□ 2.25
CHL1O00533 EDA-201ENST00000338901 1233 ntBASIC29.09■■■□□ 2.25
CHL1O00533 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.09■■■□□ 2.25
CHL1O00533 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHL1O00533 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC29.09■■■□□ 2.25
CHL1O00533 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHL1O00533 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHL1O00533 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.08■■■□□ 2.25
CHL1O00533 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.08■■■□□ 2.25
CHL1O00533 MIR4767-201ENST00000582827 78 ntBASIC29.08■■■□□ 2.25
CHL1O00533 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
CHL1O00533 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
CHL1O00533 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHL1O00533 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHL1O00533 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHL1O00533 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC29.08■■■□□ 2.25
CHL1O00533 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHL1O00533 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC29.08■■■□□ 2.24
CHL1O00533 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHL1O00533 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.07■■■□□ 2.24
CHL1O00533 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.07■■■□□ 2.24
CHL1O00533 pRNA.6-201ENST00000610482 90 ntBASIC29.07■■■□□ 2.24
CHL1O00533 pRNA.5-201ENST00000612139 90 ntBASIC29.07■■■□□ 2.24
CHL1O00533 AC079630.1-202ENST00000618127 1840 ntBASIC29.07■■■□□ 2.24
CHL1O00533 pRNA.11-201ENST00000618423 90 ntBASIC29.07■■■□□ 2.24
CHL1O00533 pRNA.13-201ENST00000619112 90 ntBASIC29.07■■■□□ 2.24
CHL1O00533 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
CHL1O00533 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHL1O00533 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHL1O00533 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC29.06■■■□□ 2.24
CHL1O00533 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
CHL1O00533 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.06■■■□□ 2.24
CHL1O00533 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHL1O00533 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHL1O00533 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHL1O00533 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC29.06■■■□□ 2.24
CHL1O00533 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHL1O00533 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHL1O00533 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.06■■■□□ 2.24
CHL1O00533 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.06■■■□□ 2.24
CHL1O00533 AL499627.2-201ENST00000606283 725 ntBASIC29.06■■■□□ 2.24
CHL1O00533 AL355001.2-201ENST00000620617 1191 ntBASIC29.06■■■□□ 2.24
CHL1O00533 AC136469.2-201ENST00000623944 1028 ntBASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms