Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRRM4A7MD48 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRRM4A7MD48 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRRM4A7MD48 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRRM4A7MD48 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRRM4A7MD48 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRRM4A7MD48 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRRM4A7MD48 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
SRRM4A7MD48 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRRM4A7MD48 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRRM4A7MD48 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.12■□□□□ 0.49
SRRM4A7MD48 AC021242.3-201ENST00000607598 1377 ntBASIC18.12■□□□□ 0.49
SRRM4A7MD48 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRRM4A7MD48 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.12■□□□□ 0.49
SRRM4A7MD48 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SRRM4A7MD48 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SRRM4A7MD48 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SRRM4A7MD48 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRRM4A7MD48 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRRM4A7MD48 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRRM4A7MD48 C1orf229-201ENST00000623686 2258 ntBASIC18.11■□□□□ 0.49
SRRM4A7MD48 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRRM4A7MD48 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRRM4A7MD48 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRRM4A7MD48 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRRM4A7MD48 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRRM4A7MD48 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRRM4A7MD48 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRRM4A7MD48 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SRRM4A7MD48 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.09■□□□□ 0.49
SRRM4A7MD48 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SRRM4A7MD48 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.09■□□□□ 0.49
SRRM4A7MD48 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.09■□□□□ 0.49
SRRM4A7MD48 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.09■□□□□ 0.49
SRRM4A7MD48 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.09■□□□□ 0.49
SRRM4A7MD48 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRRM4A7MD48 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.08■□□□□ 0.49
SRRM4A7MD48 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.08■□□□□ 0.49
SRRM4A7MD48 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SRRM4A7MD48 RARRES2P1-201ENST00000474487 481 ntBASIC18.08■□□□□ 0.48
SRRM4A7MD48 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SRRM4A7MD48 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRRM4A7MD48 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRRM4A7MD48 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SRRM4A7MD48 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.08■□□□□ 0.48
SRRM4A7MD48 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.07■□□□□ 0.48
SRRM4A7MD48 BX664725.1-201ENST00000438252 379 ntBASIC18.07■□□□□ 0.48
SRRM4A7MD48 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.07■□□□□ 0.48
SRRM4A7MD48 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.07■□□□□ 0.48
SRRM4A7MD48 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.07■□□□□ 0.48
SRRM4A7MD48 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRRM4A7MD48 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SRRM4A7MD48 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SRRM4A7MD48 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SRRM4A7MD48 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.06■□□□□ 0.48
SRRM4A7MD48 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SRRM4A7MD48 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRRM4A7MD48 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.05■□□□□ 0.48
SRRM4A7MD48 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms