Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 AL358852.1-201ENST00000623174 1268 ntBASIC27.36■■□□□ 1.97
USP17L3A6NCW0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L3A6NCW0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.35■■□□□ 1.97
USP17L3A6NCW0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L3A6NCW0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L3A6NCW0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L3A6NCW0 AC090192.1-201ENST00000517740 490 ntBASIC27.35■■□□□ 1.97
USP17L3A6NCW0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.35■■□□□ 1.97
USP17L3A6NCW0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.35■■□□□ 1.97
USP17L3A6NCW0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.35■■□□□ 1.97
USP17L3A6NCW0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 IGHV3-19-201ENST00000521488 291 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4L2-201ENST00000561772 1275 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4L6-201ENST00000626483 1275 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4L1-201ENST00000627662 1275 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4L8-201ENST00000629013 1275 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4L3-201ENST00000630187 1275 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4L7-201ENST00000630678 1275 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 DUX4L5-201ENST00000630834 1275 ntBASIC27.34■■□□□ 1.97
USP17L3A6NCW0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.34■■□□□ 1.97
USP17L3A6NCW0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 AC027612.3-201ENST00000413684 1047 ntBASIC27.33■■□□□ 1.97
USP17L3A6NCW0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
USP17L3A6NCW0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.33■■□□□ 1.96
USP17L3A6NCW0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.32■■□□□ 1.96
USP17L3A6NCW0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.32■■□□□ 1.96
USP17L3A6NCW0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.32■■□□□ 1.96
USP17L3A6NCW0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
USP17L3A6NCW0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L3A6NCW0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L3A6NCW0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L3A6NCW0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 MIR572-201ENST00000384983 95 ntBASIC27.31■■□□□ 1.96
USP17L3A6NCW0 AC123595.1-201ENST00000440769 1046 ntBASIC27.31■■□□□ 1.96
USP17L3A6NCW0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L3A6NCW0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 AL137784.2-201ENST00000607332 1000 ntBASIC27.3■■□□□ 1.96
USP17L3A6NCW0 AC022211.4-201ENST00000625094 2161 ntBASIC27.3■■□□□ 1.96
USP17L3A6NCW0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.3■■□□□ 1.96
USP17L3A6NCW0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L3A6NCW0 AC133637.1-201ENST00000624115 1537 ntBASIC27.29■■□□□ 1.96
USP17L3A6NCW0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP17L3A6NCW0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.28■■□□□ 1.96
USP17L3A6NCW0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP17L3A6NCW0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.28■■□□□ 1.96
USP17L3A6NCW0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.28■■□□□ 1.96
USP17L3A6NCW0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.28■■□□□ 1.96
USP17L3A6NCW0 MIR6084-201ENST00000622012 110 ntBASIC27.28■■□□□ 1.96
USP17L3A6NCW0 AC092437.1-201ENST00000624794 1048 ntBASIC27.28■■□□□ 1.96
USP17L3A6NCW0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.27■■□□□ 1.96
USP17L3A6NCW0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
USP17L3A6NCW0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP17L3A6NCW0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
USP17L3A6NCW0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP17L3A6NCW0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP17L3A6NCW0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms