Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 ALDH1A3-203ENST00000557963 1670 ntBASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC163A0A0D9SF12 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.53■■□□□ 1.2
CCDC163A0A0D9SF12 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC163A0A0D9SF12 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CCDC163A0A0D9SF12 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC163A0A0D9SF12 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 OR2I1P-207ENST00000453522 948 ntBASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CCDC163A0A0D9SF12 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.52■■□□□ 1.19
CCDC163A0A0D9SF12 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC163A0A0D9SF12 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CCDC163A0A0D9SF12 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 AP005435.1-201ENST00000529293 1178 ntBASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC163A0A0D9SF12 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC163A0A0D9SF12 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC163A0A0D9SF12 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.48■■□□□ 1.19
CCDC163A0A0D9SF12 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.48■■□□□ 1.19
CCDC163A0A0D9SF12 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC163A0A0D9SF12 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CCDC163A0A0D9SF12 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC163A0A0D9SF12 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 HLA-L-209ENST00000420110 1011 ntBASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC163A0A0D9SF12 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCDC163A0A0D9SF12 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCDC163A0A0D9SF12 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 FP325331.1-202ENST00000623531 1380 ntBASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC163A0A0D9SF12 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 AC006015.1-201ENST00000429970 570 ntBASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.44■■□□□ 1.18
CCDC163A0A0D9SF12 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms