Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MIR6765-201ENST00000614092 87 ntBASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 RNF126P1-201ENST00000567452 1320 ntBASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ALDH1A3-203ENST00000557963 1670 ntBASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ECEL1P1-201ENST00000373592 1742 ntBASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 AC131274.2-201ENST00000580697 1507 ntBASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 LONRF2P2-201ENST00000439212 571 ntBASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 DUX4L9-201ENST00000449051 1259 ntBASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV3D-20A0A0C4DH25 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.64■□□□□ 0.26
IGKV3D-20A0A0C4DH25 AC127496.7-201ENST00000625110 1798 ntBASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV3D-20A0A0C4DH25 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms