Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV21A0A0B4J279 C1orf229-201ENST00000623686 2258 ntBASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 KRT18P60-201ENST00000312876 1297 ntBASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV21A0A0B4J279 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAV21A0A0B4J279 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 HSD17B1P1-201ENST00000590052 955 ntBASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV21A0A0B4J279 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV21A0A0B4J279 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV21A0A0B4J279 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 BHLHE23-202ENST00000612929 1109 ntBASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV21A0A0B4J279 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 GUSBP5-202ENST00000510805 1989 ntBASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 AC120024.1-201ENST00000562672 995 ntBASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms