Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-1A0A0B4J245 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 PFN2-211ENST00000489155 636 ntTSL 4 BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-1A0A0B4J245 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV12-1A0A0B4J245 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV12-1A0A0B4J245 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRAV12-1A0A0B4J245 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 AC087741.3-201ENST00000624270 1347 ntBASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 AC026310.3-201ENST00000625186 2373 ntBASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV12-1A0A0B4J245 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L29-201ENST00000425409 679 ntBASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 AP006261.1-201ENST00000584783 668 ntBASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 AC044849.2-201ENST00000606596 710 ntBASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-1A0A0B4J245 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 AC073130.3-201ENST00000624389 2278 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L13-201ENST00000554103 1267 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L15-201ENST00000611059 1267 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L23-201ENST00000615195 1269 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L24-201ENST00000617576 1269 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L22-201ENST00000618238 1269 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L20-201ENST00000619712 1269 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L21-201ENST00000622058 1269 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L10-201ENST00000622460 1267 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 DUX4L25-201ENST00000624915 1269 ntBASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-1A0A0B4J245 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV12-1A0A0B4J245 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms