Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TRBV6-7A0A0A0MS04 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.83■□□□□ 0.61
TRBV6-7A0A0A0MS04 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV6-7A0A0A0MS04 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-7A0A0A0MS04 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.83■□□□□ 0.6
TRBV6-7A0A0A0MS04 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.83■□□□□ 0.6
TRBV6-7A0A0A0MS04 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-7A0A0A0MS04 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-7A0A0A0MS04 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.83■□□□□ 0.6
TRBV6-7A0A0A0MS04 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.83■□□□□ 0.6
TRBV6-7A0A0A0MS04 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV6-7A0A0A0MS04 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV6-7A0A0A0MS04 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV6-7A0A0A0MS04 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 AC139795.1-202ENST00000500444 432 ntBASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-7A0A0A0MS04 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-7A0A0A0MS04 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TRBV6-7A0A0A0MS04 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-7A0A0A0MS04 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-7A0A0A0MS04 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-7A0A0A0MS04 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV6-7A0A0A0MS04 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRBV6-7A0A0A0MS04 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV6-7A0A0A0MS04 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV6-7A0A0A0MS04 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV6-7A0A0A0MS04 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV6-7A0A0A0MS04 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV6-7A0A0A0MS04 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms