Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV30A0A087WSZ9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV30A0A087WSZ9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRAV30A0A087WSZ9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAV30A0A087WSZ9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV30A0A087WSZ9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV30A0A087WSZ9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV30A0A087WSZ9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRAV30A0A087WSZ9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV30A0A087WSZ9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV30A0A087WSZ9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 YBX1P4-201ENST00000392794 808 ntBASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV30A0A087WSZ9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV30A0A087WSZ9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV30A0A087WSZ9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV30A0A087WSZ9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms