Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AC006001.1-201ENST00000325130 474 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AC098614.1-201ENST00000368528 745 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 TTTY23B-201ENST00000442790 549 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 KLF2P1-201ENST00000447438 1042 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AL512310.5-201ENST00000551999 515 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 DUX4L46-201ENST00000566845 751 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AC132938.2-201ENST00000579188 680 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 BTNL10-201ENST00000595971 695 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 MKRN5P-201ENST00000445263 1467 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 SALL4P6-201ENST00000429385 1691 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 AL031719.1-201ENST00000623365 2587 ntBASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RCC2P1-201ENST00000452257 1476 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms