Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 TSPY25P-201ENST00000429463 745 ntBASIC13.45□□□□□ -0.26
TM9SF4Q92544 RPL8P2-201ENST00000430538 502 ntBASIC13.45□□□□□ -0.26
TM9SF4Q92544 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 AC073352.2-201ENST00000609385 439 ntBASIC13.45□□□□□ -0.26
TM9SF4Q92544 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC092978.1-202ENST00000637590 1327 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AP000356.3-201ENST00000382243 753 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 RPS9P1-201ENST00000419943 583 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 XBP1P1-201ENST00000436573 652 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AL109837.1-201ENST00000603272 613 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC087392.5-201ENST00000612517 489 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC009093.10-201ENST00000641956 1442 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AC005562.1-201ENST00000583030 3219 ntBASIC13.44□□□□□ -0.26
TM9SF4Q92544 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TM9SF4Q92544 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.44□□□□□ -0.26
TM9SF4Q92544 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 MRPL37P1-201ENST00000592451 1337 ntBASIC13.43□□□□□ -0.26
TM9SF4Q92544 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms