Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SNED1Q8TER0 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC16.77■□□□□ 0.27
SNED1Q8TER0 YY1P2-201ENST00000438766 948 ntBASIC16.77■□□□□ 0.27
SNED1Q8TER0 KRT19P4-201ENST00000443208 943 ntBASIC16.77■□□□□ 0.27
SNED1Q8TER0 AP000533.1-201ENST00000456143 1177 ntBASIC16.77■□□□□ 0.27
SNED1Q8TER0 RPL29P2-202ENST00000498671 657 ntBASIC16.77■□□□□ 0.27
SNED1Q8TER0 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC16.77■□□□□ 0.27
SNED1Q8TER0 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC16.77■□□□□ 0.27
SNED1Q8TER0 AC006986.1-201ENST00000612764 241 ntBASIC16.77■□□□□ 0.27
SNED1Q8TER0 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SNED1Q8TER0 AC106782.5-201ENST00000616011 337 ntBASIC16.77■□□□□ 0.27
SNED1Q8TER0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNED1Q8TER0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNED1Q8TER0 CICP16-201ENST00000502609 2813 ntBASIC16.77■□□□□ 0.27
SNED1Q8TER0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.77■□□□□ 0.27
SNED1Q8TER0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNED1Q8TER0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNED1Q8TER0 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 AC024075.2-201ENST00000598112 1473 ntBASIC16.76■□□□□ 0.27
SNED1Q8TER0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 INTS4P1-203ENST00000641008 3683 ntBASIC16.76■□□□□ 0.27
SNED1Q8TER0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 KRT8P42-201ENST00000405771 1399 ntBASIC16.76■□□□□ 0.27
SNED1Q8TER0 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 NDUFB2P1-201ENST00000506966 295 ntBASIC16.76■□□□□ 0.27
SNED1Q8TER0 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SNED1Q8TER0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNED1Q8TER0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.75■□□□□ 0.27
SNED1Q8TER0 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AC015818.1-201ENST00000451011 244 ntBASIC16.75■□□□□ 0.27
SNED1Q8TER0 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 IFNL3P1-201ENST00000595082 501 ntBASIC16.75■□□□□ 0.27
SNED1Q8TER0 RPS5-205ENST00000598495 800 ntTSL 3 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNED1Q8TER0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SNED1Q8TER0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms