Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 MIR346-201ENST00000362234 95 ntBASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 SPCS2P4-201ENST00000436160 681 ntBASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 AL121723.1-201ENST00000445194 1519 ntBASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 AP000350.6-201ENST00000609510 5637 ntBASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 LINC02486-201ENST00000604157 3000 ntBASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AC005014.1-201ENST00000432006 2976 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AC211486.1-202ENST00000416371 468 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AC211476.1-201ENST00000503899 468 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AP000344.2-201ENST00000512987 629 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AC104758.3-203ENST00000562938 2123 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 SNHG9-202ENST00000564014 471 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 AC011700.1-201ENST00000610409 2627 ntBASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
KCNIP4Q6PIL6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms