Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 FAM197Y6-201ENST00000420524 766 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 DUX4L31-201ENST00000446466 1136 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 UGT1A12P-201ENST00000447084 853 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 RN7SL646P-201ENST00000492969 297 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC026412.1-206ENST00000502273 206 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 CA6-205ENST00000480186 1493 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 AC092535.4-201ENST00000609548 397 ntBASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42BPAQ5VT25 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
CDC42BPAQ5VT25 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC20.52■□□□□ 0.87
CDC42BPAQ5VT25 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDC42BPAQ5VT25 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDC42BPAQ5VT25 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDC42BPAQ5VT25 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 HLF-202ENST00000430986 1385 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 COQ4-202ENST00000372875 928 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 OLA1P2-201ENST00000395519 1264 ntBASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 PEBP1P3-201ENST00000455475 548 ntBASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 IGKV1OR-2-201ENST00000457995 350 ntBASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 CLPP-205ENST00000596605 646 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42BPAQ5VT25 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RN7SKP255-201ENST00000363442 313 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RN7SKP203-201ENST00000363618 332 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RN7SKP71-201ENST00000364558 318 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 7SK.1-201ENST00000365328 331 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 AC103724.2-201ENST00000520355 476 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RN7SL478P-201ENST00000584358 298 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 AC233280.19-201ENST00000633223 136 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 AC007336.3-201ENST00000623886 2160 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 AL591499.1-201ENST00000307155 1153 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 MARCKSL1P2-201ENST00000401037 976 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms