Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 PFN1P12-201ENST00000455938 534 ntBASIC12.37□□□□□ -0.43
HIST1H3AP68431 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 RN7SL455P-201ENST00000580629 282 ntBASIC12.37□□□□□ -0.43
HIST1H3AP68431 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AC008620.2-201ENST00000510294 1569 ntBASIC12.37□□□□□ -0.43
HIST1H3AP68431 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 RNA5SP359-201ENST00000364838 113 ntBASIC12.36□□□□□ -0.43
HIST1H3AP68431 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.36□□□□□ -0.43
HIST1H3AP68431 BRWD1P1-201ENST00000401091 371 ntBASIC12.36□□□□□ -0.43
HIST1H3AP68431 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 AL645939.5-201ENST00000606834 243 ntBASIC12.36□□□□□ -0.43
HIST1H3AP68431 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 FMO6P-201ENST00000236166 1620 ntBASIC12.36□□□□□ -0.43
HIST1H3AP68431 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms