Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CXCR4P61073 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 ZNF493-208ENST00000599461 1769 ntBASIC12.92□□□□□ -0.34
CXCR4P61073 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CXCR4P61073 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 RN7SKP175-201ENST00000408472 289 ntBASIC12.92□□□□□ -0.34
CXCR4P61073 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.92□□□□□ -0.34
CXCR4P61073 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.92□□□□□ -0.34
CXCR4P61073 RFPL4AP1-201ENST00000530883 850 ntBASIC12.92□□□□□ -0.34
CXCR4P61073 AL512310.5-201ENST00000551999 515 ntBASIC12.92□□□□□ -0.34
CXCR4P61073 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.92□□□□□ -0.34
CXCR4P61073 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CXCR4P61073 WFDC1-204ENST00000613603 549 ntBASIC12.92□□□□□ -0.34
CXCR4P61073 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.92□□□□□ -0.34
CXCR4P61073 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.92□□□□□ -0.34
CXCR4P61073 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.92□□□□□ -0.34
CXCR4P61073 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CXCR4P61073 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 AC007952.5-201ENST00000572818 1486 ntBASIC12.91□□□□□ -0.34
CXCR4P61073 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 AOC4P-203ENST00000566825 2289 ntBASIC12.91□□□□□ -0.34
CXCR4P61073 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 AC102953.2-201ENST00000609755 3026 ntBASIC12.91□□□□□ -0.34
CXCR4P61073 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.91□□□□□ -0.34
CXCR4P61073 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
CXCR4P61073 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 RN7SL48P-201ENST00000579283 293 ntBASIC12.91□□□□□ -0.34
CXCR4P61073 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 AC008494.3-201ENST00000606615 944 ntBASIC12.91□□□□□ -0.34
CXCR4P61073 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms