Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 BRD7P5-201ENST00000299197 1822 ntBASIC13.8□□□□□ -0.2
GDF5P43026 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.8□□□□□ -0.2
GDF5P43026 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.8□□□□□ -0.2
GDF5P43026 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.8□□□□□ -0.2
GDF5P43026 PPT1-213ENST00000641319 2388 ntBASIC13.8□□□□□ -0.2
GDF5P43026 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.8□□□□□ -0.2
GDF5P43026 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF5P43026 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 MARK2P9-201ENST00000430958 1727 ntBASIC13.79□□□□□ -0.2
GDF5P43026 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF5P43026 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
GDF5P43026 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF5P43026 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF5P43026 TSPY25P-201ENST00000429463 745 ntBASIC13.79□□□□□ -0.2
GDF5P43026 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF5P43026 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.79□□□□□ -0.2
GDF5P43026 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF5P43026 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF5P43026 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF5P43026 MIR3615-201ENST00000581999 87 ntBASIC13.79□□□□□ -0.2
GDF5P43026 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 AC068760.1-201ENST00000493579 1953 ntBASIC13.79□□□□□ -0.2
GDF5P43026 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
GDF5P43026 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
GDF5P43026 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF5P43026 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GDF5P43026 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GDF5P43026 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF5P43026 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
GDF5P43026 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.78□□□□□ -0.2
GDF5P43026 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.78□□□□□ -0.2
GDF5P43026 AC135782.3-201ENST00000562782 2105 ntBASIC13.78□□□□□ -0.2
GDF5P43026 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 AC020658.7-201ENST00000624274 2442 ntBASIC13.78□□□□□ -0.2
GDF5P43026 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
GDF5P43026 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
GDF5P43026 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF5P43026 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF5P43026 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF5P43026 EIF4HP1-201ENST00000453115 687 ntBASIC13.78□□□□□ -0.2
GDF5P43026 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF5P43026 RCC2P8-201ENST00000502779 1035 ntBASIC13.78□□□□□ -0.2
GDF5P43026 MARK2P5-201ENST00000507649 634 ntBASIC13.78□□□□□ -0.2
GDF5P43026 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF5P43026 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF5P43026 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.78□□□□□ -0.2
GDF5P43026 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF5P43026 AL451050.2-201ENST00000606967 682 ntBASIC13.78□□□□□ -0.2
GDF5P43026 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.78□□□□□ -0.2
GDF5P43026 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms