Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR6756-201ENST00000616240 63 ntBASIC16.42■□□□□ 0.22
ERCC3P19447 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.42■□□□□ 0.22
ERCC3P19447 LINC00431-202ENST00000636375 159 ntBASIC16.42■□□□□ 0.22
ERCC3P19447 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ERCC3P19447 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ERCC3P19447 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC3P19447 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC3P19447 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 AL354702.1-201ENST00000442006 1960 ntBASIC16.42■□□□□ 0.22
ERCC3P19447 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ERCC3P19447 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC3P19447 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC3P19447 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC3P19447 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC3P19447 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ERCC3P19447 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC3P19447 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.41■□□□□ 0.22
ERCC3P19447 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.41■□□□□ 0.22
ERCC3P19447 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.41■□□□□ 0.22
ERCC3P19447 LINC00634-202ENST00000505157 222 ntBASIC16.41■□□□□ 0.22
ERCC3P19447 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC3P19447 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.41■□□□□ 0.22
ERCC3P19447 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ERCC3P19447 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.41■□□□□ 0.22
ERCC3P19447 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 AL591122.2-201ENST00000624125 1853 ntBASIC16.41■□□□□ 0.22
ERCC3P19447 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ERCC3P19447 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC3P19447 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC3P19447 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ERCC3P19447 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 AC012617.1-204ENST00000586340 2305 ntBASIC16.4■□□□□ 0.22
ERCC3P19447 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ERCC3P19447 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC3P19447 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.4■□□□□ 0.22
ERCC3P19447 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.4■□□□□ 0.22
ERCC3P19447 AL161932.2-201ENST00000435436 679 ntBASIC16.4■□□□□ 0.22
ERCC3P19447 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.4■□□□□ 0.22
ERCC3P19447 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 AC084752.1-201ENST00000509766 622 ntBASIC16.4■□□□□ 0.22
ERCC3P19447 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 AC068867.1-201ENST00000559855 150 ntBASIC16.4■□□□□ 0.22
ERCC3P19447 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ERCC3P19447 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
ERCC3P19447 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 AL133467.4-201ENST00000602953 725 ntBASIC16.4■□□□□ 0.22
ERCC3P19447 AC138466.5-201ENST00000624002 808 ntBASIC16.4■□□□□ 0.22
ERCC3P19447 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ERCC3P19447 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC3P19447 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms