Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 AC005618.3-201ENST00000624928 458 ntBASIC16.89■□□□□ 0.29
CHGBP05060 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHGBP05060 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 PDXDC2P-206ENST00000534700 1315 ntBASIC16.89■□□□□ 0.29
CHGBP05060 AC074138.1-201ENST00000611182 1303 ntBASIC16.89■□□□□ 0.29
CHGBP05060 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.89■□□□□ 0.29
CHGBP05060 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.89■□□□□ 0.29
CHGBP05060 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.89■□□□□ 0.29
CHGBP05060 AC019109.1-201ENST00000401725 1874 ntBASIC16.88■□□□□ 0.29
CHGBP05060 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CHGBP05060 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 AC061965.1-201ENST00000560524 1465 ntBASIC16.88■□□□□ 0.29
CHGBP05060 AL161772.1-201ENST00000610494 4412 ntBASIC16.88■□□□□ 0.29
CHGBP05060 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CHGBP05060 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.88■□□□□ 0.29
CHGBP05060 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 STK24P1-201ENST00000455035 1291 ntBASIC16.88■□□□□ 0.29
CHGBP05060 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.88■□□□□ 0.29
CHGBP05060 RN7SL564P-201ENST00000496309 250 ntBASIC16.88■□□□□ 0.29
CHGBP05060 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.88■□□□□ 0.29
CHGBP05060 AC091769.1-201ENST00000619576 568 ntBASIC16.88■□□□□ 0.29
CHGBP05060 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHGBP05060 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHGBP05060 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHGBP05060 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHGBP05060 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CHGBP05060 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHGBP05060 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.87■□□□□ 0.29
CHGBP05060 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.87■□□□□ 0.29
CHGBP05060 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.87■□□□□ 0.29
CHGBP05060 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 AL512306.1-201ENST00000432698 848 ntBASIC16.87■□□□□ 0.29
CHGBP05060 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.87■□□□□ 0.29
CHGBP05060 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.87■□□□□ 0.29
CHGBP05060 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.87■□□□□ 0.29
CHGBP05060 SCARNA12-201ENST00000459155 270 ntBASIC16.87■□□□□ 0.29
CHGBP05060 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHGBP05060 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.87■□□□□ 0.29
CHGBP05060 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.87■□□□□ 0.29
CHGBP05060 MIR3180-2-201ENST00000581748 88 ntBASIC16.87■□□□□ 0.29
CHGBP05060 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.87■□□□□ 0.29
CHGBP05060 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CHGBP05060 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.87■□□□□ 0.29
CHGBP05060 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHGBP05060 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 IL9RP3-201ENST00000442856 1674 ntBASIC16.87■□□□□ 0.29
CHGBP05060 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CHGBP05060 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.87■□□□□ 0.29
CHGBP05060 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CHGBP05060 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHGBP05060 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.87■□□□□ 0.29
CHGBP05060 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.87■□□□□ 0.29
CHGBP05060 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms