Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOEP02649 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.88□□□□□ -0.03
APOEP02649 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOEP02649 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOEP02649 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.88□□□□□ -0.03
APOEP02649 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.88□□□□□ -0.03
APOEP02649 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 AC245884.6-201ENST00000515672 1067 ntBASIC14.88□□□□□ -0.03
APOEP02649 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.88□□□□□ -0.03
APOEP02649 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.88□□□□□ -0.03
APOEP02649 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.88□□□□□ -0.03
APOEP02649 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.88□□□□□ -0.03
APOEP02649 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 AC090643.2-201ENST00000623442 2029 ntBASIC14.88□□□□□ -0.03
APOEP02649 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.88□□□□□ -0.03
APOEP02649 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOEP02649 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.87□□□□□ -0.03
APOEP02649 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
APOEP02649 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
APOEP02649 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.87□□□□□ -0.03
APOEP02649 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
APOEP02649 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
APOEP02649 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
APOEP02649 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.87□□□□□ -0.03
APOEP02649 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.87□□□□□ -0.03
APOEP02649 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 AC073150.1-201ENST00000450406 1084 ntBASIC14.87□□□□□ -0.03
APOEP02649 DUX4L50-201ENST00000455245 715 ntBASIC14.87□□□□□ -0.03
APOEP02649 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
APOEP02649 NUP210P1-202ENST00000504322 710 ntBASIC14.87□□□□□ -0.03
APOEP02649 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.87□□□□□ -0.03
APOEP02649 AL512310.5-201ENST00000551999 515 ntBASIC14.87□□□□□ -0.03
APOEP02649 AC093752.3-201ENST00000567343 901 ntBASIC14.87□□□□□ -0.03
APOEP02649 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.87□□□□□ -0.03
APOEP02649 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.87□□□□□ -0.03
APOEP02649 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.87□□□□□ -0.03
APOEP02649 AC091812.3-201ENST00000621362 345 ntBASIC14.87□□□□□ -0.03
APOEP02649 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.87□□□□□ -0.03
APOEP02649 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 AC015909.3-201ENST00000572855 1794 ntBASIC14.87□□□□□ -0.03
APOEP02649 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.87□□□□□ -0.03
APOEP02649 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
APOEP02649 AC131212.3-201ENST00000624087 4219 ntBASIC14.87□□□□□ -0.03
APOEP02649 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.87□□□□□ -0.03
APOEP02649 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
APOEP02649 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
APOEP02649 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOEP02649 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms