Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 AL391647.1-201ENST00000395664 511 ntBASIC13.79□□□□□ -0.2
KRT6AP02538 GAPDHP21-201ENST00000450301 1010 ntBASIC13.79□□□□□ -0.2
KRT6AP02538 TUBB8P8-201ENST00000458717 1058 ntBASIC13.79□□□□□ -0.2
KRT6AP02538 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.79□□□□□ -0.2
KRT6AP02538 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.79□□□□□ -0.2
KRT6AP02538 DUX4L45-201ENST00000566406 1057 ntBASIC13.79□□□□□ -0.2
KRT6AP02538 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KRT6AP02538 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
KRT6AP02538 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 CYP4F23P-201ENST00000593402 1579 ntBASIC13.79□□□□□ -0.2
KRT6AP02538 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.79□□□□□ -0.2
KRT6AP02538 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRT6AP02538 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 MARK2P9-201ENST00000430958 1727 ntBASIC13.78□□□□□ -0.2
KRT6AP02538 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
KRT6AP02538 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.78□□□□□ -0.2
KRT6AP02538 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.78□□□□□ -0.2
KRT6AP02538 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.78□□□□□ -0.2
KRT6AP02538 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.78□□□□□ -0.2
KRT6AP02538 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.78□□□□□ -0.2
KRT6AP02538 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KRT6AP02538 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
KRT6AP02538 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 AC009474.1-201ENST00000455096 1565 ntBASIC13.78□□□□□ -0.2
KRT6AP02538 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KRT6AP02538 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.78□□□□□ -0.2
KRT6AP02538 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KRT6AP02538 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRT6AP02538 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms