Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 KRT8P24-201ENST00000560290 1559 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC015813.5-201ENST00000624641 1514 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC011239.2-201ENST00000624820 1489 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 COQ4-202ENST00000372875 928 ntTSL 2 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 UGT1A12P-201ENST00000447084 853 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 RN7SL173P-201ENST00000461853 292 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC103724.2-201ENST00000520355 476 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC133555.4-201ENST00000569081 152 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 LINC02486-201ENST00000604157 3000 ntBASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
BIVM-ERCC5R4GMW8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 BEND3P1-201ENST00000421591 1944 ntBASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC22.55■■□□□ 1.2
BIVM-ERCC5R4GMW8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 KRT8P6-201ENST00000399259 1207 ntBASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 JPT2-214ENST00000569765 782 ntTSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 PCTP-206ENST00000573500 919 ntTSL 3 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC026271.1-201ENST00000447794 1348 ntBASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC22.54■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC005089.1-201ENST00000619486 2241 ntBASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC007336.3-201ENST00000623886 2160 ntBASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms