Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AL355864.2-201ENST00000447420 863 ntBASIC12.22□□□□□ -0.45
NICN1Q9BSH3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 RNA5SP486-201ENST00000515961 83 ntBASIC12.22□□□□□ -0.45
NICN1Q9BSH3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 AC190387.1-201ENST00000551683 408 ntBASIC12.22□□□□□ -0.45
NICN1Q9BSH3 RN7SL204P-201ENST00000582831 262 ntBASIC12.22□□□□□ -0.45
NICN1Q9BSH3 AC073413.1-201ENST00000603927 732 ntBASIC12.22□□□□□ -0.45
NICN1Q9BSH3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 AL118506.1-201ENST00000601296 3082 ntBASIC12.22□□□□□ -0.45
NICN1Q9BSH3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NICN1Q9BSH3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.21□□□□□ -0.45
NICN1Q9BSH3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.21□□□□□ -0.45
NICN1Q9BSH3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NICN1Q9BSH3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NICN1Q9BSH3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms