Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 HSPA8P9-201ENST00000485881 1943 ntBASIC12□□□□□ -0.49
SEC22CQ9BRL7 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 INE1-201ENST00000456273 945 ntBASIC12□□□□□ -0.49
SEC22CQ9BRL7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 AL596442.2-201ENST00000610240 980 ntBASIC12□□□□□ -0.49
SEC22CQ9BRL7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 AL845472.1-202ENST00000624675 4080 ntBASIC12□□□□□ -0.49
SEC22CQ9BRL7 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12□□□□□ -0.49
SEC22CQ9BRL7 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12□□□□□ -0.49
SEC22CQ9BRL7 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms