Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 HMGA1P1-201ENST00000415560 1062 ntBASIC13.53□□□□□ -0.24
CGREF1Q99674 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.53□□□□□ -0.24
CGREF1Q99674 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 AL645933.1-201ENST00000440087 609 ntBASIC13.53□□□□□ -0.24
CGREF1Q99674 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.53□□□□□ -0.24
CGREF1Q99674 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 AC190387.1-201ENST00000551683 408 ntBASIC13.53□□□□□ -0.24
CGREF1Q99674 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 RN7SL204P-201ENST00000582831 262 ntBASIC13.53□□□□□ -0.24
CGREF1Q99674 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.53□□□□□ -0.24
CGREF1Q99674 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 AC006453.4-201ENST00000636949 1252 ntBASIC13.53□□□□□ -0.24
CGREF1Q99674 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CGREF1Q99674 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CGREF1Q99674 AC108024.1-201ENST00000626286 1721 ntBASIC13.53□□□□□ -0.24
CGREF1Q99674 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CGREF1Q99674 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.52□□□□□ -0.24
CGREF1Q99674 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.52□□□□□ -0.24
CGREF1Q99674 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.52□□□□□ -0.24
CGREF1Q99674 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.52□□□□□ -0.24
CGREF1Q99674 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CGREF1Q99674 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
CGREF1Q99674 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.52□□□□□ -0.24
CGREF1Q99674 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CGREF1Q99674 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.52□□□□□ -0.24
CGREF1Q99674 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CGREF1Q99674 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CGREF1Q99674 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 AC092933.1-201ENST00000393644 945 ntBASIC13.52□□□□□ -0.25
CGREF1Q99674 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CGREF1Q99674 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.52□□□□□ -0.25
CGREF1Q99674 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.52□□□□□ -0.25
CGREF1Q99674 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.52□□□□□ -0.25
CGREF1Q99674 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.52□□□□□ -0.25
CGREF1Q99674 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.52□□□□□ -0.25
CGREF1Q99674 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.52□□□□□ -0.25
CGREF1Q99674 ZACNP1-201ENST00000612259 710 ntBASIC13.52□□□□□ -0.25
CGREF1Q99674 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.52□□□□□ -0.25
CGREF1Q99674 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 KRT8P4-201ENST00000509735 1454 ntBASIC13.52□□□□□ -0.25
CGREF1Q99674 AC025183.3-201ENST00000623526 1482 ntBASIC13.52□□□□□ -0.25
CGREF1Q99674 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 MSNP1-201ENST00000511640 1732 ntBASIC13.52□□□□□ -0.25
CGREF1Q99674 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CGREF1Q99674 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CGREF1Q99674 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CGREF1Q99674 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CGREF1Q99674 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CGREF1Q99674 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CGREF1Q99674 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CGREF1Q99674 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CGREF1Q99674 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms