Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCMH1Q96GD3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCMH1Q96GD3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SCMH1Q96GD3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AC118758.2-201ENST00000614242 2813 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AL807761.2-201ENST00000422849 729 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AC092580.1-201ENST00000433998 658 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 TPT1P11-201ENST00000458482 498 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 NDUFS6P1-201ENST00000485187 316 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 SORD2P-201ENST00000558556 1069 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AL031713.1-201ENST00000564813 661 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 MIR5572-201ENST00000583188 137 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AC009560.1-201ENST00000620208 434 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AL354702.1-201ENST00000442006 1960 ntBASIC13.16□□□□□ -0.3
SCMH1Q96GD3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCMH1Q96GD3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 MYADML-201ENST00000474610 2147 ntBASIC13.15□□□□□ -0.3
SCMH1Q96GD3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.15□□□□□ -0.3
SCMH1Q96GD3 AP000356.3-201ENST00000382243 753 ntBASIC13.15□□□□□ -0.3
SCMH1Q96GD3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms