Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS8Q8N3P4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS8Q8N3P4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC21.65■■□□□ 1.06
VPS8Q8N3P4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 BAK1P1-201ENST00000317045 636 ntBASIC21.65■■□□□ 1.06
VPS8Q8N3P4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 AC041040.1-201ENST00000425197 460 ntBASIC21.65■■□□□ 1.06
VPS8Q8N3P4 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 CES1P2-201ENST00000566467 1242 ntBASIC21.65■■□□□ 1.06
VPS8Q8N3P4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 AC126755.5-201ENST00000622756 267 ntBASIC21.65■■□□□ 1.06
VPS8Q8N3P4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS8Q8N3P4 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 U3.5-201ENST00000363448 216 ntBASIC21.64■■□□□ 1.06
VPS8Q8N3P4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 PGAM1P12-201ENST00000505622 748 ntBASIC21.64■■□□□ 1.06
VPS8Q8N3P4 MT3-202ENST00000561640 514 ntTSL 3 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 MANEA-AS1-201ENST00000564541 2268 ntBASIC21.64■■□□□ 1.06
VPS8Q8N3P4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC21.64■■□□□ 1.06
VPS8Q8N3P4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 LINC00638-201ENST00000555578 2518 ntBASIC21.64■■□□□ 1.05
VPS8Q8N3P4 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 DDC-212ENST00000615193 1674 ntTSL 3 BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC21.64■■□□□ 1.05
VPS8Q8N3P4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 PSAT1P2-201ENST00000426107 972 ntBASIC21.63■■□□□ 1.05
VPS8Q8N3P4 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS8Q8N3P4 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 AL358781.1-202ENST00000321081 1360 ntBASIC21.62■■□□□ 1.05
VPS8Q8N3P4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 KRT8P42-201ENST00000405771 1399 ntBASIC21.62■■□□□ 1.05
VPS8Q8N3P4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC21.62■■□□□ 1.05
VPS8Q8N3P4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms