Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AL359845.1-201ENST00000458202 1648 ntBASIC12.7□□□□□ -0.38
LRRC28Q86X40 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC099336.1-201ENST00000417053 1171 ntBASIC12.7□□□□□ -0.38
LRRC28Q86X40 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC023310.1-201ENST00000554836 735 ntBASIC12.7□□□□□ -0.38
LRRC28Q86X40 ENPP7P14-201ENST00000621765 1040 ntBASIC12.7□□□□□ -0.38
LRRC28Q86X40 AC008687.7-202ENST00000637404 953 ntBASIC12.7□□□□□ -0.38
LRRC28Q86X40 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRC28Q86X40 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRC28Q86X40 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC010970.1-201ENST00000445125 1848 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 CICP1-201ENST00000416803 2410 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC026954.1-201ENST00000429771 1293 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 RNA5SP412-201ENST00000516234 123 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC131206.1-201ENST00000538078 1211 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC078819.1-201ENST00000547454 765 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC012085.1-201ENST00000548270 765 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 BAP1-211ENST00000615113 489 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms