Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 AC211476.2-201ENST00000608799 708 ntBASIC20.56■□□□□ 0.88
CDC42BPAQ5VT25 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 AL121753.2-201ENST00000624581 1461 ntBASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 PMF1-201ENST00000368273 884 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 OR4C14P-201ENST00000440929 923 ntBASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 AL031590.1-202ENST00000641466 1737 ntBASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 PI4KAP2-201ENST00000360806 2080 ntBASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 STK25-235ENST00000543554 2556 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42BPAQ5VT25 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42BPAQ5VT25 AC091807.1-201ENST00000418838 1544 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC005912.2-201ENST00000619492 2400 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 TUBB2BP1-201ENST00000404155 871 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 TULP3P1-202ENST00000453253 1291 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 INO80E-209ENST00000567254 625 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC046158.3-201ENST00000624947 2558 ntBASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42BPAQ5VT25 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms