Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AL391647.1-201ENST00000395664 511 ntBASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 ACTG1P17-201ENST00000558391 1119 ntBASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AL590824.1-201ENST00000403828 1349 ntBASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 FRMPD2B-201ENST00000431305 1347 ntBASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL4Q0D2K0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AC067931.2-201ENST00000623655 2003 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 RPL13AP3-202ENST00000494676 1473 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AC008132.1-202ENST00000342005 1389 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AL365181.3-201ENST00000605886 3222 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AL008707.1-201ENST00000422498 534 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AC005077.2-201ENST00000449786 690 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AC073150.1-201ENST00000450406 1084 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AC116345.2-201ENST00000512837 523 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AC090857.1-201ENST00000527400 390 ntBASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
NIPAL4Q0D2K0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms