Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RHBDL3P58872 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RHBDL3P58872 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.46■□□□□ 0.23
RHBDL3P58872 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RHBDL3P58872 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RHBDL3P58872 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RHBDL3P58872 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.46■□□□□ 0.23
RHBDL3P58872 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.46■□□□□ 0.23
RHBDL3P58872 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RHBDL3P58872 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RHBDL3P58872 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RHBDL3P58872 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.46■□□□□ 0.23
RHBDL3P58872 AP000244.1-201ENST00000424582 201 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.46■□□□□ 0.23
RHBDL3P58872 AC079250.1-201ENST00000456046 531 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RHBDL3P58872 AC092903.1-201ENST00000466506 262 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.46■□□□□ 0.23
RHBDL3P58872 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC16.46■□□□□ 0.23
RHBDL3P58872 MIR3940-201ENST00000579148 102 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.46■□□□□ 0.23
RHBDL3P58872 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.46■□□□□ 0.23
RHBDL3P58872 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.46■□□□□ 0.23
RHBDL3P58872 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RHBDL3P58872 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 HMGB1P24-201ENST00000611897 328 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RHBDL3P58872 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC16.46■□□□□ 0.23
RHBDL3P58872 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RHBDL3P58872 AL109809.1-201ENST00000418979 1367 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 AC023908.3-201ENST00000564211 3047 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RHBDL3P58872 AL122018.1-201ENST00000446607 2310 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RHBDL3P58872 AC040160.2-201ENST00000623816 1675 ntBASIC16.46■□□□□ 0.23
RHBDL3P58872 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RHBDL3P58872 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RHBDL3P58872 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RHBDL3P58872 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RHBDL3P58872 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
RHBDL3P58872 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 AC022080.1-201ENST00000366255 781 ntBASIC16.45■□□□□ 0.22
RHBDL3P58872 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RHBDL3P58872 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.45■□□□□ 0.22
RHBDL3P58872 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.45■□□□□ 0.22
RHBDL3P58872 AC063952.3-201ENST00000467756 308 ntBASIC16.45■□□□□ 0.22
RHBDL3P58872 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 AC005274.1-201ENST00000623460 802 ntBASIC16.45■□□□□ 0.22
RHBDL3P58872 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 RCC2P5-201ENST00000492126 1487 ntBASIC16.45■□□□□ 0.22
RHBDL3P58872 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RHBDL3P58872 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.45■□□□□ 0.22
RHBDL3P58872 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RHBDL3P58872 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms