Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SLC1A1P43005 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 AC078875.1-201ENST00000431907 724 ntBASIC14.84□□□□□ -0.03
SLC1A1P43005 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC1A1P43005 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 Z93015.1-201ENST00000451718 390 ntBASIC14.84□□□□□ -0.03
SLC1A1P43005 RNMTL1P1-201ENST00000454103 560 ntBASIC14.84□□□□□ -0.03
SLC1A1P43005 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 AC005730.2-201ENST00000564549 1184 ntBASIC14.84□□□□□ -0.03
SLC1A1P43005 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC1A1P43005 LINC02084-201ENST00000606069 1096 ntBASIC14.84□□□□□ -0.03
SLC1A1P43005 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SLC1A1P43005 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 AC008620.2-201ENST00000510294 1569 ntBASIC14.84□□□□□ -0.03
SLC1A1P43005 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC1A1P43005 AC004899.1-201ENST00000424687 1714 ntBASIC14.83□□□□□ -0.03
SLC1A1P43005 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC1A1P43005 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC1A1P43005 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC1A1P43005 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
SLC1A1P43005 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 CICP20-201ENST00000443330 2801 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SLC1A1P43005 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 MIR663B-201ENST00000408361 115 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 EIF4HP1-201ENST00000453115 687 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.83□□□□□ -0.04
SLC1A1P43005 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 CHCHD2P2-201ENST00000503744 321 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC1A1P43005 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.83□□□□□ -0.04
SLC1A1P43005 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.04
SLC1A1P43005 AC010328.2-201ENST00000597698 1111 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 FMO6P-201ENST00000236166 1620 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SLC1A1P43005 MSNP1-201ENST00000511640 1732 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 AC108024.1-201ENST00000626286 1721 ntBASIC14.83□□□□□ -0.04
SLC1A1P43005 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SLC1A1P43005 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms