Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.64■□□□□ 0.41
COL15A1P39059 MIR8071-1-201ENST00000616769 65 ntBASIC17.64■□□□□ 0.41
COL15A1P39059 MIR8071-2-201ENST00000616772 65 ntBASIC17.64■□□□□ 0.41
COL15A1P39059 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.64■□□□□ 0.41
COL15A1P39059 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COL15A1P39059 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL15A1P39059 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 TSPY26P-202ENST00000565928 3884 ntBASIC17.63■□□□□ 0.41
COL15A1P39059 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 AC005722.1-201ENST00000431878 964 ntBASIC17.63■□□□□ 0.41
COL15A1P39059 AC078814.4-201ENST00000546650 327 ntBASIC17.63■□□□□ 0.41
COL15A1P39059 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
COL15A1P39059 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL15A1P39059 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.63■□□□□ 0.41
COL15A1P39059 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.63■□□□□ 0.41
COL15A1P39059 SALL4P6-201ENST00000429385 1691 ntBASIC17.62■□□□□ 0.41
COL15A1P39059 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COL15A1P39059 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.62■□□□□ 0.41
COL15A1P39059 ZNF877P-201ENST00000437614 612 ntBASIC17.62■□□□□ 0.41
COL15A1P39059 AC025594.1-201ENST00000469533 543 ntBASIC17.62■□□□□ 0.41
COL15A1P39059 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.62■□□□□ 0.41
COL15A1P39059 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COL15A1P39059 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 RCC2P1-201ENST00000452257 1476 ntBASIC17.62■□□□□ 0.41
COL15A1P39059 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL15A1P39059 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.62■□□□□ 0.41
COL15A1P39059 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL15A1P39059 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.61■□□□□ 0.41
COL15A1P39059 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL15A1P39059 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.61■□□□□ 0.41
COL15A1P39059 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
COL15A1P39059 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.61■□□□□ 0.41
COL15A1P39059 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL15A1P39059 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL15A1P39059 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.61■□□□□ 0.41
COL15A1P39059 RPL10-203ENST00000406022 748 ntTSL 3 BASIC17.61■□□□□ 0.41
COL15A1P39059 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.61■□□□□ 0.41
COL15A1P39059 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.61■□□□□ 0.41
COL15A1P39059 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.61■□□□□ 0.41
COL15A1P39059 RPS18P9-201ENST00000482817 460 ntBASIC17.61■□□□□ 0.41
COL15A1P39059 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.61■□□□□ 0.41
COL15A1P39059 CD44-224ENST00000526669 870 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms