Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.85■□□□□ 0.13
CIITAP33076 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CIITAP33076 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.84■□□□□ 0.13
CIITAP33076 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 ODCP-201ENST00000459650 1639 ntBASIC15.84■□□□□ 0.13
CIITAP33076 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 MIR33B-201ENST00000385104 96 ntBASIC15.84■□□□□ 0.13
CIITAP33076 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 HINT2P1-201ENST00000419438 481 ntBASIC15.84■□□□□ 0.13
CIITAP33076 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.84■□□□□ 0.13
CIITAP33076 AC078991.1-201ENST00000437297 610 ntBASIC15.84■□□□□ 0.13
CIITAP33076 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.84■□□□□ 0.13
CIITAP33076 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.84■□□□□ 0.13
CIITAP33076 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 GRPEL2P1-201ENST00000453145 339 ntBASIC15.84■□□□□ 0.13
CIITAP33076 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CIITAP33076 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CIITAP33076 AP000911.2-201ENST00000534330 502 ntBASIC15.84■□□□□ 0.13
CIITAP33076 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 SNORD3B-1-201ENST00000577988 758 ntBASIC15.84■□□□□ 0.13
CIITAP33076 AP005264.5-201ENST00000590066 467 ntBASIC15.84■□□□□ 0.13
CIITAP33076 AC018635.2-201ENST00000608625 364 ntBASIC15.84■□□□□ 0.13
CIITAP33076 AC007881.3-201ENST00000608897 607 ntBASIC15.84■□□□□ 0.13
CIITAP33076 AC087392.5-201ENST00000612517 489 ntBASIC15.84■□□□□ 0.13
CIITAP33076 MIR6842-201ENST00000612539 65 ntBASIC15.84■□□□□ 0.13
CIITAP33076 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.84■□□□□ 0.13
CIITAP33076 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CIITAP33076 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.84■□□□□ 0.13
CIITAP33076 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.84■□□□□ 0.13
CIITAP33076 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CIITAP33076 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
CIITAP33076 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CIITAP33076 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.83■□□□□ 0.13
CIITAP33076 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.83■□□□□ 0.13
CIITAP33076 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CIITAP33076 SALL4P6-201ENST00000429385 1691 ntBASIC15.83■□□□□ 0.13
CIITAP33076 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CIITAP33076 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CIITAP33076 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CIITAP33076 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CIITAP33076 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 AC111170.3-201ENST00000624282 2464 ntBASIC15.83■□□□□ 0.12
CIITAP33076 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.83■□□□□ 0.12
CIITAP33076 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CIITAP33076 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.83■□□□□ 0.12
CIITAP33076 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CIITAP33076 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.83■□□□□ 0.12
CIITAP33076 EEF1DP2-201ENST00000433698 843 ntBASIC15.83■□□□□ 0.12
CIITAP33076 AC069218.1-201ENST00000435269 762 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms