Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 AC138969.2-201ENST00000532739 9932 ntBASIC14.09□□□□□ -0.15
VARSP26640 AC090643.2-201ENST00000623442 2029 ntBASIC14.09□□□□□ -0.15
VARSP26640 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.09□□□□□ -0.15
VARSP26640 ZNF767P-206ENST00000513792 565 ntBASIC14.09□□□□□ -0.15
VARSP26640 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 AC027237.1-201ENST00000560942 655 ntBASIC14.09□□□□□ -0.15
VARSP26640 DUX4L46-201ENST00000566845 751 ntBASIC14.09□□□□□ -0.15
VARSP26640 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 AC132192.2-201ENST00000596206 1147 ntBASIC14.09□□□□□ -0.15
VARSP26640 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.09□□□□□ -0.15
VARSP26640 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.09□□□□□ -0.15
VARSP26640 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VARSP26640 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.09□□□□□ -0.15
VARSP26640 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
VARSP26640 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
VARSP26640 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
VARSP26640 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
VARSP26640 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
VARSP26640 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VARSP26640 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
VARSP26640 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.08□□□□□ -0.15
VARSP26640 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.08□□□□□ -0.15
VARSP26640 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC14.08□□□□□ -0.16
VARSP26640 POM121L10P-201ENST00000436994 1285 ntBASIC14.08□□□□□ -0.16
VARSP26640 BX284668.4-201ENST00000453917 508 ntBASIC14.08□□□□□ -0.16
VARSP26640 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.08□□□□□ -0.16
VARSP26640 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.08□□□□□ -0.16
VARSP26640 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 AC104982.3-201ENST00000581995 514 ntBASIC14.08□□□□□ -0.16
VARSP26640 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.08□□□□□ -0.16
VARSP26640 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.08□□□□□ -0.16
VARSP26640 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.08□□□□□ -0.16
VARSP26640 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VARSP26640 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VARSP26640 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 AC244394.1-201ENST00000435000 1665 ntBASIC14.07□□□□□ -0.16
VARSP26640 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms