Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RCC2P8-201ENST00000502779 1035 ntBASIC12.73□□□□□ -0.37
HLA-DOBP13765 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 MIR4538-201ENST00000581377 78 ntBASIC12.73□□□□□ -0.37
HLA-DOBP13765 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC079781.5-202ENST00000641784 3743 ntBASIC12.72□□□□□ -0.37
HLA-DOBP13765 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 FAM86MP-201ENST00000340703 885 ntBASIC12.72□□□□□ -0.37
HLA-DOBP13765 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 TSPY25P-201ENST00000429463 745 ntBASIC12.72□□□□□ -0.37
HLA-DOBP13765 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC004898.1-201ENST00000451057 766 ntBASIC12.72□□□□□ -0.37
HLA-DOBP13765 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 MIR3615-201ENST00000581999 87 ntBASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AL022328.3-201ENST00000607943 679 ntBASIC12.72□□□□□ -0.37
HLA-DOBP13765 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DOBP13765 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DOBP13765 BRD7P5-201ENST00000299197 1822 ntBASIC12.72□□□□□ -0.37
HLA-DOBP13765 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms