Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.63□□□□□ -0.55
DEFA4P12838 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
DEFA4P12838 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.63□□□□□ -0.55
DEFA4P12838 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.63□□□□□ -0.55
DEFA4P12838 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.63□□□□□ -0.55
DEFA4P12838 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.63□□□□□ -0.55
DEFA4P12838 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.63□□□□□ -0.55
DEFA4P12838 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.63□□□□□ -0.55
DEFA4P12838 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
DEFA4P12838 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
DEFA4P12838 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
DEFA4P12838 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.63□□□□□ -0.55
DEFA4P12838 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
DEFA4P12838 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
DEFA4P12838 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.62□□□□□ -0.55
DEFA4P12838 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
DEFA4P12838 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
DEFA4P12838 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
DEFA4P12838 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
DEFA4P12838 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.62□□□□□ -0.55
DEFA4P12838 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
DEFA4P12838 AL391280.1-201ENST00000506969 1062 ntBASIC11.62□□□□□ -0.55
DEFA4P12838 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.62□□□□□ -0.55
DEFA4P12838 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.62□□□□□ -0.55
DEFA4P12838 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.62□□□□□ -0.55
DEFA4P12838 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.62□□□□□ -0.55
DEFA4P12838 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 BTNL10-201ENST00000595971 695 ntBASIC11.62□□□□□ -0.55
DEFA4P12838 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 AC138951.2-201ENST00000623455 1161 ntBASIC11.62□□□□□ -0.55
DEFA4P12838 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
DEFA4P12838 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
DEFA4P12838 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
DEFA4P12838 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
DEFA4P12838 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
DEFA4P12838 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.61□□□□□ -0.55
DEFA4P12838 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms